CK934815

Overview
NameCK934815
Unique NameCK934815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LISIN (10 kDa chaperonin OS=Listeria innocua GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92          

HSP 2 Score: 90.8929 bits (224), Expect = 1.134e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CLOBB (10 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            IKPLG+RV++K    EEKT  GI L  +A+  PQ  EVVAVG G  V   K+++ VK G +V+YSKY+GTE++ +G  ++I+++DD++ I+E
Sbjct:    3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94          

HSP 2 Score: 75.8702 bits (185), Expect = 3.775e-13
Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL +RV IK  EAEE T  G++LT ++KE P    V+AVGPG +  +G +  + +  G+ V+YSKY+G + K  DG  Y+ L+  +++A++
Sbjct:    3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CLOBA (10 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            IKPLG+RV++K    EEKT  GI L  +A+  PQ  EVVAVG G  V   K+++ VK G +V+YSKY+GTE++ +G  ++I+++DD++ I+E
Sbjct:    3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94          

HSP 2 Score: 75.485 bits (184), Expect = 4.930e-13
Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL +RV IK  EAEE T  G++LT ++KE P    V+AVGPG +  +G +  + +  G+ V+YSKY+G + K  DG  Y+ L+  +++A++
Sbjct:    3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            ++KPL DRV+VK    EEKT GG+++P   + KPQ GEVVAVG GK     + L++ V  G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95          

HSP 2 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +A GN V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEV-AVEGEDYLIMRESDIFAIL 94          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACWK (10 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ +AEE TA G++L E +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++A++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAII 93          

HSP 2 Score: 91.6633 bits (226), Expect = 6.648e-18
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ I+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAII 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.749e-18
Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            IKPLGDRV+++I   EEKT  GI LP  A+ KPQ G+VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  +LI+RE D++ ++
Sbjct:    2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 85.1149 bits (209), Expect = 6.222e-16
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL DRV I++ E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+ LR S+++AV+
Sbjct:    2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.749e-18
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDR++++    EEKT  GI LP +A+ KPQ G+VVAVG G+ T    K+ + VK G  +I+SKYAGTE+++ G  +LI+RE DV+ I+
Sbjct:    2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93          

HSP 2 Score: 87.8113 bits (216), Expect = 9.600e-17
Identity = 40/93 (43.01%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DR+ I+  ++EE TA G++L +++KEKP  G V+AVG G + + G +  L +  G+++++SKYAG + K  +GT Y+ LR S+V+A++
Sbjct:    2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK-YEGTEYLILRESDVLAII 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.749e-18
Identity = 42/92 (45.65%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G+VVA G G+ +    ++ + VK G ++I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 89.7373 bits (221), Expect = 2.526e-17
Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ E+EE TA G++L +++KEKP  G V+A G G + E G R  L +  G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_ARTS2 (10 kDa chaperonin OS=Arthrobacter sp. (strain FB24) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.749e-18
Identity = 44/93 (47.31%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL DR+ ++  EAE+TTA GL++ ++++EKP  G V+AVGPG   E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++
Sbjct:    5 IKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95          

HSP 2 Score: 82.4185 bits (202), Expect = 4.033e-15
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            SIKPL DR++V+    E+ T  G+ +P +AQ KPQ GEVVAVG G+     ++ + V  G  VIYSKY GTE++  G  +L++   DV+ I+
Sbjct:    4 SIKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LACZE (10 kDa chaperonin OS=Lactobacillus zeae GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880
            LKPL DRV ++V E EE T GG++L   +K+KP  G V+AVG G L  EG R P+++  G+TV+Y KYAG++ K  +G +Y+ L   ++MA+
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVK-YEGQDYLVLHEKDIMAI 92          

HSP 2 Score: 89.7373 bits (221), Expect = 2.526e-17
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580
            +KPLGDRV+V++   EE+T GGI L + A+ KPQ G+VVAVGEG    + K L ++VK G  V+Y KYAG+E+++ G ++L++ E D++ I
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92          
The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_LISIN1.340e-1846.7410 kDa chaperonin OS=Listeria innocua GN=groS PE=3... [more]
CH10_CLOBB1.340e-1847.8310 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH10_CLOBA1.340e-1847.8310 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH10_CHLPB1.340e-1847.8710 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH10_BACWK1.340e-1849.4610 kDa chaperonin OS=Bacillus weihenstephanensis (... [more]
CH10_BACTR1.749e-1847.8310 kDa chaperonin OS=Bacillus thermoglucosidasius ... [more]
CH10_BACSK1.749e-1850.0010 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH10_BACLD1.749e-1845.6510 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH10_ARTS21.749e-1847.3110 kDa chaperonin OS=Arthrobacter sp. (strain FB24... [more]
CH10_LACZE2.285e-1846.7410 kDa chaperonin OS=Lactobacillus zeae GN=groS PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bp
GGGGGTCTAGGGTTTTATCTTCTCGACTCTTCTTCAAATTTCAACTAGAA
ACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAAT
CTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGCTAAC
AGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTC
TCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAA
CGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAA
GTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGA
CTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAA
ACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGT
TGGGAAGGCTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCT
ATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAACGGCGCAAATCATCTC
ATAGTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAA
GGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTG
AGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAA
CCTTCCATTGGAACGGTCATTGCTGTTGGACCCGGTCCTCTAGATGAGGA
AGGTAATAGGAAACCTCTATCCATTGCACCAGGGAACACGGTGATGTATT
CGAAGTATGCAGGGAATGACTTCAAGGGCAGTGATGGTACCAACTACATT
GCTTTAAGAGCTTCTGAAGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTT
TACTTGAGCGAGGCTTTATATGTATTAGTGAATTG
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