CK934825

Overview
NameCK934825
Unique NameCK934825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.069e-47
Identity = 71/143 (49.65%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K+++  FF QT HETTGG   +P G YA GYCF RE     + Y           YGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWMT Q +KPSCH+VI   W PSA D +A R+PGYG+  NI
Sbjct:   78 KKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMGNGY-----------YGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNI 206          

HSP 2 Score: 75.8702 bits (185), Expect = 1.069e-47
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  284 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            +G I++  +F+ +L+ RND RC A  FYTYDAFI AA +FP FG +G++T RK+EIAAFF
Sbjct:   26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 85          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.686e-46
Identity = 68/143 (47.55%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            ++++  FF QT HETTGG   A    +  GYCF R+     +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q +KPS H+VII  W PSA D  A R+PGYG+  NI
Sbjct:   79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAIGQELV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNI 205          

HSP 2 Score: 80.1073 bits (196), Expect = 5.686e-46
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  284 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            +G I++  +F ++L+ RND RCPA  FYTYDAFI AA +FP FG +G++T R++EIAAFF
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFF 86          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.640e-45
Identity = 67/143 (46.85%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            ++++  FF QT HETTGG   A    +  GYCF R+     +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q +KPS H+VII  W PSA D +A R PG G+  NI
Sbjct:   79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAIRQDLV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNI 205          

HSP 2 Score: 81.6481 bits (200), Expect = 1.640e-45
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  284 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            +G I++  +F ++L+ RND RCPA  FYTYDAFI AA +FP FG SG++T R++EIAAFF
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFF 86          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.025e-45
Identity = 68/148 (45.95%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F AQ  HETTGGW  AP G YAWG C+  E+   SS YCD     +PC  GK Y+GRGPIQ+SWN+NY               NP+++A    ++F++A+WFWMT + +KPSCH+V++ E++P   DV A R  G+GL  NI
Sbjct:  101 KREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSS-YCDATDKQWPCYPGKSYHGRGPIQISWNFNY--GPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNI 245          

HSP 2 Score: 60.4622 bits (145), Expect = 8.025e-45
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 2
Query:  260 GTAGDGG------ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            G  G GG       +  I+S +++  L  +++D  CPAR FYTY +F+ AA  FP F  +G    RKRE+AAF
Sbjct:   35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAF 107          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.884e-40
Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F AQT HETTGGWP AP G Y        E+G+ S             Y+GRGPIQ+S+NYNY               NPDL+ +D  + FK+A+WFWMT Q  KPS H+VI   W PS+ D  AGR+PGYG+  NI
Sbjct:   45 KREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNI 165          

HSP 2 Score: 58.151 bits (139), Expect = 1.884e-40
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 2
Query:  284 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            +  +IS  +FE +L +R         FYTYDAFI AAK+FPAF  +G+  +RKRE+AAF
Sbjct:    1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAF 51          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 4.683e-35
Identity = 52/146 (35.62%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F A     T+G   D     +AWG C         +D+C   ++PC    KY  RGPIQL+ N+NY               NPDL+  DP++SFK+A+WFWM+   +KPSCH++++     +AN   A R+P  G+  NI
Sbjct:  180 KREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNI 316          

HSP 2 Score: 73.9442 bits (180), Expect = 4.683e-35
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 2
Query:  170 GWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG   DYC    CQ  C+  V G      G +        +++  +F+ +  +R D  CP++ FY+Y +F+ AA++FPAFG  G+   RKRE+AAF
Sbjct:   91 GWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.338e-27
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTA 761
            K ++  FFA   HET               +C+  E+  +++ YCDP    +PC    KYYGRGP+Q+SWNYNY               +P  +A D V++FK+A+WFWM +
Sbjct:  120 KREIAAFFAHATHETGH-------------FCYISEINKSNA-YCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215          

HSP 2 Score: 70.0922 bits (170), Expect = 1.338e-27
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 2
Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            G+CG T +YC +GCQS      C       G+ G G  +  +++   F  + + +    C  + FYT  AF+ A K +P F + G++   KREIAAFF
Sbjct:   35 GYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.953e-27
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  531 YCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTA 761
            +C+  E+  AS DYCD N   YPC  GK Y+GRGPIQLSWNYNY  C             P+L++++P ++F++ +WFWM +
Sbjct:  136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNS 215          

HSP 2 Score: 61.2326 bits (147), Expect = 2.953e-27
Identity = 37/100 (37.00%), Postives = 49/100 (49.00%), Query Frame = 2
Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGD--GGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            G+CG T  YC  GC+S       G C    GT     GG +G I+++  F  ++       C  + FYT D+FI AA  FP F NS    + +REIA  F
Sbjct:   39 GYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.103e-26
Identity = 51/146 (34.93%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNA-----GRLPG 848
            K ++  FFA   HET                C+  E+  AS DYCD N   +PC+   KYYGRGP+Q+SWNYNY               +PD +A DP +SFK+A+WFWM       + H+V++  +  +   +N      G+ PG
Sbjct:  138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVMLQGFGATIRAINGALECNGKNPG 262          

HSP 2 Score: 52.7582 bits (125), Expect = 1.103e-26
Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 2
Query:  170 GWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            G+CG   DYC +GC+S  C     G      G  G GG  G   + +  + F + ++ +    C  + FYT  +F+ AA ++  F         KREIAAFF
Sbjct:   44 GYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145          
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.104e-26
Identity = 39/109 (35.78%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFW 752
            K ++  FFA   HET               +C+  E+   S +YCD     +PC  GK YYGRGP+Q+SWN+NY               +PD +A  PVL+F++A+W+W
Sbjct:  119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212          

HSP 2 Score: 67.0106 bits (162), Expect = 1.104e-26
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 2
Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            G+CG  +DYC  GCQ+           P D  A +   +  I++ + F  L+   +D  C A+ FYT DAF+ AA  +P+FG +G+    KREIAAFF
Sbjct:   40 GFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126          
The following BLAST results are available for this feature:
BLAST of CK934825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIT_PETHY1.069e-4749.65Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIQ_TOBAC5.686e-4647.55Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC1.640e-4546.85Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ8.025e-4545.95Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_AVESA1.884e-4045.45Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
AGI_URTDI4.683e-3535.62Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHIB_MAIZE1.338e-2735.71Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHI4_BRANA2.953e-2745.12Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHI5_ORYSJ1.103e-2634.93Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI6_ORYSJ1.104e-2635.78Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934825 ID=CK934825; Name=CK934825; organism=Citrus sinensis; type=EST; length=870bp
GGGGATACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGT
ACTAGGAGGCTCAGCAGGGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAG
GGGAGTGTTGTAGTCGATTGGTTGGTGTGGCCTAACAACAGACTACTGTT
GTGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGAT
CCCGACGACGGGACGGCTGGTGATGGCGGTGAACTGGGCAAGATCATCTC
AAGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGCC
CTGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCT
TTTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAAT
TGCTGCCTTTTTTTGCCCAAACTGGCCACGAAACTACTGGGGGATGGCCC
GATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGT
TGGCGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGA
AGTACTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTA
CGGTGCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGA
CCTTCTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCT
GGATGACTGCACAGCCATCAAAGCCATCGTGCCACGAAGTCATTATCGAC
GAATGGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATA
CGGTCTAACNNNNAATATAA
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