CK934825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.872e-26 Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 755 K ++ +FA HET C+ E +++YC + YPC +Y+GRGP+QLSWNYNY+ N+PD++ DP++SFK+++WFW+ Sbjct: 97 KREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190 HSP 2 Score: 64.6994 bits (156), Expect = 1.872e-26 Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = 2 Query: 170 GWCGLTTDYCCEGCQSNCNQVVCGEC-DPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463 G+CG + DYC GCQ+ G C DP +G DG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+F Sbjct: 16 GYCGNSYDYCGPGCQA-------GPCWDPCEG---DGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 4.121e-26 Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNA-----GRLPG 848 K ++ FFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM + H+V+ + + +N G+ PG Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQGFGATIRAINGALECNGKNPG 259 HSP 2 Score: 56.9954 bits (136), Expect = 4.121e-26 Identity = 34/103 (33.01%), Postives = 50/103 (48.54%), Query Frame = 2 Query: 170 GWCGLTTDYCCEGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463 G+CG T YC +GCQS C + G G AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFF Sbjct: 42 GYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.183e-25 Identity = 46/113 (40.71%), Postives = 54/113 (47.79%), Query Frame = 3 Query: 441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMT 758 K ++ FFA HETT C E G YCD + YPC KYYGRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT Sbjct: 136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233 HSP 2 Score: 60.077 bits (144), Expect = 1.183e-25 Identity = 39/110 (35.45%), Postives = 51/110 (46.36%), Query Frame = 2 Query: 164 SIGWCGLTTDYCCEGCQSNCNQVVCGECDPDD----------GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463 + G+CG T YC G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFF Sbjct: 40 NFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.540e-25 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 755 K ++ FFA HET +C+ E+ +++ YCD + +PC KYYGRGP+Q+SWNYNY +P+ +A D V++FK+A+WFWM Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNA-YCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224 HSP 2 Score: 65.855 bits (159), Expect = 1.540e-25 Identity = 37/99 (37.37%), Postives = 48/99 (48.48%), Query Frame = 2 Query: 170 GWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463 G+CG T YC +GCQS C G G G GG + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFF Sbjct: 40 GYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.458e-22 Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 3 Query: 531 YCFNREVGAASSDYCDPN----YPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 755 +C+ E+ AS DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 HSP 2 Score: 53.5286 bits (127), Expect = 2.458e-22 Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 2 Query: 170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463 G+CG DYC GCQ Q C P + I++ +++ + D C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 38 GYCGTGEDYCGTGCQ----QGPCTTASPPPSNNVNAD----ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.037e-19 Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 170 GWCGLTTDYCCEGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAF 403 GWCG T DYC +GCQS C+ G+ CD G GDG G L II + F+ LL++RND RC A FYTYDAFI AAK F Sbjct: 44 GWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121 HSP 2 Score: 27.7202 bits (60), Expect = 3.037e-19 Identity = 12/22 (54.55%), Postives = 13/22 (59.09%), Query Frame = 3 Query: 108 GSAGNCG---SGVVCPGGECCS 164 GSA CG +CPGG CCS Sbjct: 20 GSAEQCGRQAGDALCPGGLCCS 41 The following BLAST results are available for this feature:
BLAST of CK934825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934825 ID=CK934825; Name=CK934825; organism=Citrus sinensis; type=EST; length=870bpback to top |