CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_YERE8 (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +LR L LGP +IK GQ+++ R D+ ++L +LQD V F +A IE +G PLE F + +A+AS+ QV+ A L+E G++V +KV RP I PII D+ L LA + Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPAIADQLALLQDRVAPFDGALARKHIEIAMGGPLETWFDDFEQEALASASIAQVHTARLKENGQEVVLKVIRPDILPIIKADVRLMYRLAGW 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANAC (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas axonopodis pv. citri GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F Q A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 51 RGARLRLALQELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGQAARLIVEAALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBSL (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio splendidus (strain LGP32) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +DKE+ +LR L LGP +IK GQ+++ R D+ ++L +LQD V F Q+A +E+ LG L+ F+ + +A+AS+ QV+ A L+E+G ++ +KV RP I P+I DL L +A Sbjct: 49 QDKEL----GHRLRLALQELGPVWIKFGQMMSTRRDLFPPHIADQLALLQDQVAPFDGQLAKRDMEKALGGRLDNWFTDFDIEPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIDADLKLMHRMA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANCP (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG----EDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 51 RGARLRLALQELGPIFVKFGQILSTRRDLIPPDVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFAAFDTTPLASASIAQVHAATLPPDANGLRREVVVKVLRPDIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANCB (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG----EDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 51 RGARLRLALQELGPIFVKFGQILSTRRDLIPPDVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFAAFDTTPLASASIAQVHAATLPPDANGLRREVVVKVLRPDIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANC8 (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG----EDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 51 RGARLRLALQELGPIFVKFGQILSTRRDLIPPDVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFAAFDTTPLASASIAQVHAATLPPDANGLRREVVVKVLRPDIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBC3 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +LR L LGP +IK GQ+++ R D+ + L +LQD V F A +IEEELG PLE F + +A+AS+ QV+ A L+ G DV +KV RP I P I D+ L +A Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPYIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHISS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella sonnei (strain Ss046) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHIFL (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHIF8 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri serotype 5b (strain 8401) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |