CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHIDS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHIBS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 4 (strain Sb227) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHIB3 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_PASMU (Probable ubiquinone biosynthesis protein ubiB OS=Pasteurella multocida GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRE---------TGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +LR L LGP +IK GQ+L+ R D+ D +EL +LQD V F ++A IE+ LG PLE F + + +A+AS+ QV+ A ++ G++V +KV RP I+ +I DL L +AS+ Sbjct: 56 RLRLALQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETWFDEFNETALASASIAQVHTAKFKQNAPHLENRLAGKEVVLKVLRPNIQQMINADLSLMYKVASW 184
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECOSE (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain SE11) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLI (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12) GN=ubiB PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLC (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECOHS (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O9:H4 (strain HS) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECODH (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12 / DH10B) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ECOBW (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12 / BW2952) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IE +G P+EA F + +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |