CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_AERS4 (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas salmonicida (strain A449) GN=ubiB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 499 KEVVPDRARQLRNLLC--NLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 K+ PD +R R L LGP FIK GQ+L+ R D++ D EL +LQD VP F Q A IEE LG P+E +F +A+AS+ QV+ L+E G ++ IKV RP IEP+I DL L +TLA Sbjct: 45 KKKQPDLSRGARIRLAFEALGPIFIKFGQMLSTRRDLLPPDIAEELAMLQDRVPPFCGQAARLKIEESLGCPVETLFDDFDETPLASASIAQVHTGRLKENGREIVIKVIRPDIEPVIEADLRLMQTLA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: Y889_SYNY3 (Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC 6803) GN=slr0889 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20 Identity = 63/164 (38.41%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 391 ESRGAVIS-LMSRGVEIVWSLGLYWSNLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 + RG +I L+S G W Y + L VG + P+ L +L LGP +IK GQ+L+ RPD++ Y+N L LQ +VP P ++++ E +PL F +I S+ IAA S+GQ++RA L ++GE VAIKV+RPGI+ I+ +D L + +A Sbjct: 9 DRRGEIIKVLLSNG----WD---YMNGLLTLGKVGEPQIPTPE---VLTKILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLPWSAIEDLLQREFPQPLGETFQEIESEPIAAGSIGQIHRAVL-QSGETVAIKVKRPGIDVIVEQDSLLIKDVA 161
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_PSEPG (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas putida (strain GB-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20 Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDL 858 R +LR L +LGP FIK GQ+L+ R D++ D +EL +LQD VP F Q A +IEE+LG + VFS+ + +A+AS+ QV+ A L+ TGE+V +KV RPG++P+I +DL Sbjct: 56 RGARLRLALQDLGPIFIKFGQLLSTRRDLLPTDIADELMLLQDRVPPFDPQKAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLK-TGEEVVVKVVRPGLKPVIAQDL 168
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_AZOVD (Probable ubiquinone biosynthesis protein ubiB OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20 Identity = 57/124 (45.97%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRD---LFLFRTLA 879 RA +LR L +LGP FIK GQ+L+ R D++ ED +EL LQD VP F Q + +IEE+LG ++ F++ S+ +A+AS+ QV+ A L+ TGE+V +KV RPG++ +I +D L+LF LA Sbjct: 56 RAVRLRLALQDLGPIFIKFGQILSTRRDLLPEDIADELTWLQDRVPPFNPQQSVALIEEQLGARVDEAFARFDSEPLASASVAQVHAAQLK-TGEEVVVKVVRPGLKAVIRQDLAWLYLFARLA 178
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMB (Probable ubiquinone biosynthesis protein ubiB OS=Neisseria meningitidis serogroup B GN=ubiB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 54/117 (46.15%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 520 ARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFR 870 A +LR L +LGP FIK GQVL+ RPD++ DY EL LQD VP F +++ IE+ LG+ +E ++++ ++ IA+AS+ QV++A L +GE VA+KV RP + P+I +DL L R Sbjct: 51 AVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARL-HSGEQVAVKVLRPNLLPVIEQDLSLMR 166
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_DIAST (Probable ubiquinone biosynthesis protein ubiB OS=Diaphorobacter sp. (strain TPSY) GN=ubiB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20 Identity = 64/175 (36.57%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 409 ISLMSRGVEIVWSLGLY-------------WSNLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +S +RG+ IVW + Y W + K P R ++LR L +LGP F+K GQVL+ R D++ D +EL +LQD VP F VA IE RP+ VF Q +A+AS+ QV+ A +R+ +VA+KV RPG+ P+I +DL L R +A + Sbjct: 1 MSRFARGITIVWVVLRYGLDELVLSTFRQPWLRAVTRVITFGRKLDAP-RGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADELALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAREVAVKVLRPGMLPVIDKDLALMRMMAGW 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_BURP8 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20 Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +LR L +LGP F+K GQVL+ R D++R D EL LQD VP F + VA IIE+ LG P++ +F +A+AS+ QV+ ATL+ G+ VA+KV RP + P+I DL L R +A Sbjct: 51 RLRLALESLGPIFVKFGQVLSTRRDLLRPDIATELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTIFDDFERVPVASASIAQVHFATLKIGQHAGKQVAVKVLRPNMLPVIDSDLALLRDIA 171
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ACISJ (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax sp. (strain JS42) GN=ubiB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20 Identity = 64/175 (36.57%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 409 ISLMSRGVEIVWSLGLY-------------WSNLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +S +RG+ IVW + Y W + K P R ++LR L +LGP F+K GQVL+ R D++ D +EL +LQD VP F VA IE RP+ VF Q +A+AS+ QV+ A +R+ +VA+KV RPG+ P+I +DL L R +A + Sbjct: 1 MSRFARGITIVWVVLRYGLDELVLSTFRQPWLRAVTRVITFGRKLDAP-RGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADELALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAREVAVKVLRPGMLPVIDKDLALMRMMAGW 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_PSEE4 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas entomophila (strain L48) GN=ubiB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20 Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 499 KEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDL 858 K + R +LR L +LGP FIK GQ+L+ R D++ D +EL +LQD VP F Q A +IEE+LG + VFS+ + +A+AS+ QV+ A L+ +GE+V +KV RPG++P+I +DL Sbjct: 50 KPLALSRGARLRLALQDLGPIFIKFGQLLSTRRDLLPTDIADELMLLQDRVPPFDPQHAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLK-SGEEVVVKVVRPGLKPVIAQDL 168
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_PSEP1 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.858e-20 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDL 858 R +LR L +LGP FIK GQ+L+ R D++ D +EL +LQD VP F + A +IEE+LG + VFS+ + +A+AS+ QV+ A L+ TGE+V +KV RPG++P+I +DL Sbjct: 56 RGARLRLALQDLGPIFIKFGQLLSTRRDLLPPDIADELMLLQDRVPPFDPKKAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLK-TGEEVVVKVVRPGLKPVIAQDL 168 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |