CK934893

Overview
NameCK934893
Unique NameCK934893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.926e-61
Identity = 64/111 (57.66%), Postives = 86/111 (77.48%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI +V +GTL VGF++S+Q  N L AK LN GDVFVFP+GLIHFQFN+G T A A +AL+SQ  G +TIA+T+FG+ P ++P+ L +AFQ+D   V++LQ +F
Sbjct:  112 PHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          

HSP 2 Score: 120.939 bits (302), Expect = 1.926e-61
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   49 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            +T+K + FL               +DP  LQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G   T  NV  + GLNTLGIS  RIDYAP GQ
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQ 109          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.344e-59
Identity = 75/111 (67.57%), Postives = 92/111 (82.88%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI +V +GTL VGFVTS+  +N L +KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA+TVFGANP+INP  L KAFQL+P++V DLQ KF
Sbjct:  112 PHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          

HSP 2 Score: 98.9821 bits (245), Expect = 1.344e-59
Identity = 53/109 (48.62%), Postives = 62/109 (56.88%), Query Frame = 1
Query:   49 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQ 109          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.602e-59
Identity = 75/111 (67.57%), Postives = 90/111 (81.08%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI +V  GTL VGFVTS+  +N L  KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA TVFGANP+INP+ L KAFQ+DP++V DLQ KF
Sbjct:  112 PHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          

HSP 2 Score: 98.2117 bits (243), Expect = 6.602e-59
Identity = 52/109 (47.71%), Postives = 61/109 (55.96%), Query Frame = 1
Query:   49 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQ 109          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.260e-56
Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+GLIHFQ NIGK  A A+++L+SQ PG + I +T+FG+ P I+P+ L KAFQLDPK++  LQ KF
Sbjct:  113 PHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 222          

HSP 2 Score: 102.834 bits (255), Expect = 2.260e-56
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G   T  NV QIPGLNTLGIS  RIDY   GQ
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQ 110          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.457e-55
Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF LD  IV+ +Q  F
Sbjct:  111 PHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          

HSP 2 Score: 112.464 bits (280), Expect = 2.457e-55
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQ 108          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.459e-55
Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PHIHPRA+EI  +LEG+LYVGFVTS+   N L  KVLNKGDVFVFPQGLIHFQFN G  +  A +AL+SQ PG +TIA+ VFG+ P I+ D L KAFQ++ KIV  +Q +F
Sbjct:  107 PHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216          

HSP 2 Score: 97.8265 bits (242), Expect = 2.459e-55
Identity = 51/84 (60.71%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +DP  LQD CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYG 103          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.674e-54
Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI  VLEG+LYVGFVTS+   N L  KV+NKGDVFVFP+GL+HFQFN G T+A A  AL+SQ PG +T+A+ VFG+ PSI  D L KAFQ++  +V  +Q KF
Sbjct:  114 PHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223          

HSP 2 Score: 94.3597 bits (233), Expect = 2.674e-54
Identity = 50/84 (59.52%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +DP HLQD+CVA  D    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G
Sbjct:   29 SDPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHG 110          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.120e-52
Identity = 68/111 (61.26%), Postives = 83/111 (74.77%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+EI  VLEG+LYVGFV S+   N L  KVLNKGDVFVFPQGL+HFQFN G  NA A +AL+SQ PG +T+ + VFG+ PSI+ D L KAFQ+D  I+  +Q +F
Sbjct:  114 PHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223          

HSP 2 Score: 89.7373 bits (221), Expect = 4.120e-52
Identity = 49/84 (58.33%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +DPG LQD CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G   T  NV QIPGLNT+G+S  RIDYAP G
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNG 110          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.550e-51
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PHIHPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ D VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:  108 PHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          

HSP 2 Score: 97.8265 bits (242), Expect = 1.550e-51
Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGG 104          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.433e-51
Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PHIHPRA+EI +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IAD VFG+NPSI  + L KAFQLD K+V+ L   F
Sbjct:  112 PHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          

HSP 2 Score: 90.8929 bits (224), Expect = 3.433e-51
Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQ 375
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF +SGL    NT N LG   T  +V +IPGLNTLG+S  R+D+A  GQ
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQ 109          
The following BLAST results are available for this feature:
BLAST of CK934893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL18_ARATH1.926e-6157.66Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL111_ARATH1.344e-5967.57Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH6.602e-5967.57Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL112_ARATH2.260e-5661.26Putative germin-like protein subfamily 1 member 12... [more]
GL12_ARATH2.457e-5555.86Putative germin-like protein subfamily 1 member 2 ... [more]
GL21_ORYSJ2.459e-5563.06Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL23_ORYSJ2.674e-5461.26Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL22_ORYSJ4.120e-5261.26Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL13_ARATH1.550e-5156.76Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL16_ARATH3.433e-5159.46Germin-like protein subfamily 1 member 6 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934893 ID=CK934893; Name=CK934893; organism=Citrus sinensis; type=EST; length=936bp
GGGGAAAACACTTGATTAAAGTTTGAGATAGGCACATCNNNTGACTTAAT
CACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGG
CTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGT
GTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTG
CAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAG
GCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGGTGAAACAGATGCA
AATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCG
TATTGACTATGCACCATATGGCCAAAGGCACCTCACATTCACCCCCGTGC
CAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGA
CATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGA
GATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGG
AAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTG
AAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCC
GATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCT
TCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTA
ATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTAT
CATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAG
GCTGACTGTGGCCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCA
GCTAAGCCTTTTCCAAAAAAAAAAAAAAAAAAAAAA
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