CK934893

Overview
NameCK934893
Unique NameCK934893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.413e-39
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I  T+FGA+P +  D L + FQ++ + V+ +++KF
Sbjct:  116 PHTHPRASEMVFVMEGELDVGFITTA---NVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          

HSP 2 Score: 72.4034 bits (176), Expect = 2.413e-39
Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            D   LQDVCVA  D    V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGG 112          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 9.065e-39
Identity = 54/111 (48.65%), Postives = 78/111 (70.27%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +  T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:  111 PHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          

HSP 2 Score: 67.0106 bits (162), Expect = 9.065e-39
Identity = 40/84 (47.62%), Postives = 48/84 (57.14%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +D   LQD CV   D K    +NG  CK      A DFFFSGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGG 107          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.539e-38
Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P +  + L KAFQ+  K V+ +++KF
Sbjct:  106 PHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          

HSP 2 Score: 75.0998 bits (183), Expect = 1.539e-38
Identity = 44/83 (53.01%), Postives = 50/83 (60.24%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGG 102          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.005e-38
Identity = 53/111 (47.75%), Postives = 80/111 (72.07%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V +  T+FG+ P I    L +AF+ D   V++L++KF
Sbjct:  111 PHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          

HSP 2 Score: 65.0846 bits (157), Expect = 2.005e-38
Identity = 40/84 (47.62%), Postives = 47/84 (55.95%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGG 107          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.789e-37
Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:  110 PHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          

HSP 2 Score: 68.9366 bits (167), Expect = 4.789e-37
Identity = 42/85 (49.41%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGG 106          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.141e-37
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 629
            PH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:  108 PHTHPRATEVVFVLEGTLDVGFLTTA---NKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          

HSP 2 Score: 84.7297 bits (208), Expect = 8.141e-37
Identity = 46/83 (55.42%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGG 104          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.049e-36
Identity = 51/115 (44.35%), Postives = 76/115 (66.09%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 725
            PHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:  110 PHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          

HSP 2 Score: 69.3218 bits (168), Expect = 3.049e-36
Identity = 42/85 (49.41%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGG 106          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.779e-36
Identity = 51/114 (44.74%), Postives = 77/114 (67.54%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:  110 PHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          

HSP 2 Score: 66.6254 bits (161), Expect = 8.779e-36
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGG 106          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.146e-35
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 725
            PHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:   87 PHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          

HSP 2 Score: 66.6254 bits (161), Expect = 1.146e-35
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGG 83          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.291e-35
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 716
            PH HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +AD +  A   +  D + K    D   V  ++  FI
Sbjct:  118 PHYHPRASETAVVLAGAVYFGFVTSYP-DSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA--PLPVDLVAKTLLTDEATVDKIRANFI 226          

HSP 2 Score: 77.7962 bits (190), Expect = 3.291e-35
Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKP------GNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            DP  LQD CVA  DP   V VNG  CKDP    A+DFFFSG+G+P      G TA+R   G T  +V+ IPGLNTLG SA R+D AP G
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASR-RYGFTARSVD-IPGLNTLGASAARVDVAPGG 114          
The following BLAST results are available for this feature:
BLAST of CK934893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
NEC1_NICLS2.413e-3949.55Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GLT2_ARATH9.065e-3948.65Germin-like protein subfamily T member 2 OS=Arabid... [more]
RHRE_PEA1.539e-3849.55Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GLT1_ARATH2.005e-3847.75Germin-like protein subfamily T member 1 OS=Arabid... [more]
GER2_WHEAT4.789e-3745.61Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL21_ARATH8.141e-3754.22Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GER3_WHEAT3.049e-3644.35Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU8.779e-3644.74Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.146e-3545.22Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL51_ORYSJ3.291e-3545.54Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934893 ID=CK934893; Name=CK934893; organism=Citrus sinensis; type=EST; length=936bp
GGGGAAAACACTTGATTAAAGTTTGAGATAGGCACATCNNNTGACTTAAT
CACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGG
CTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGT
GTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTG
CAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAG
GCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGGTGAAACAGATGCA
AATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCG
TATTGACTATGCACCATATGGCCAAAGGCACCTCACATTCACCCCCGTGC
CAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGA
CATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGA
GATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGG
AAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTG
AAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCC
GATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCT
TCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTA
ATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTAT
CATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAG
GCTGACTGTGGCCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCA
GCTAAGCCTTTTCCAAAAAAAAAAAAAAAAAAAAAA
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