CK934893

Overview
NameCK934893
Unique NameCK934893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.234e-34
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:  115 PHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGG 228          

HSP 2 Score: 59.6918 bits (143), Expect = 1.234e-34
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G   T+ +V + PG+NTLG+S  R+D+AP G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGG 111          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.727e-34
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:  115 PHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 228          

HSP 2 Score: 59.6918 bits (143), Expect = 2.727e-34
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G   T+ +V + PG+NTLG+S  R+D+AP G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGG 111          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.027e-34
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:  113 PHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          

HSP 2 Score: 58.5362 bits (140), Expect = 6.027e-34
Identity = 38/86 (44.19%), Postives = 47/86 (54.65%), Query Frame = 1
Query:  121 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            TD   LQD CVA  D    V VNG  CK P  A  ++F FS     G    AN  G   T+ +V + PG+NTLG+S  R+D+AP G
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGG 109          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.852e-34
Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 3
Query:  384 HIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L K+FQ+D KI+K L++KF
Sbjct:  119 HSHPRATELIHVVAGRVLAGFVSTA---GEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          

HSP 2 Score: 65.855 bits (159), Expect = 7.852e-34
Identity = 41/98 (41.84%), Postives = 50/98 (51.02%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQRHLTFTP 396
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G   T AN E  PGLNTLG+S  R+D AP G   L   P
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHP 122          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.465e-33
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 722
            PH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:  113 PHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          

HSP 2 Score: 55.0694 bits (131), Expect = 8.465e-33
Identity = 38/84 (45.24%), Postives = 45/84 (53.57%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G   T  +V   PG+NTLG+S  RID+AP G
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGG 109          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.869e-32
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 3
Query:  384 HIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F  P+GL+HFQ+N G  +A A +  NSQ PG V  A  +FGA+P I    L K+FQ+D +I+K L++KF
Sbjct:  125 HSHPRAAELVHVITGRMLVGFVSTA---GKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          

HSP 2 Score: 64.3142 bits (155), Expect = 1.869e-32
Identity = 38/99 (38.38%), Postives = 51/99 (51.52%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYGQRHLTFTPVPAK 408
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G   L   P  A+
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAE 132          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.733e-29
Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+FV P GLIH++ N+GKT     + +    P EV +  T+    P+I  + L  AF+ D K +  L++KF
Sbjct:  118 PHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          

HSP 2 Score: 59.3066 bits (142), Expect = 8.733e-29
Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1
Query:  139 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAP--YGQRH 381
            QD CVA  D +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP  Y Q H
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPH 119          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.510e-28
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L K F +    V  +++KF
Sbjct:  114 PHSHPRASELVLVLSGEVMVGFTTAA---NRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          

HSP 2 Score: 60.4622 bits (145), Expect = 2.510e-28
Identity = 35/83 (42.17%), Postives = 45/83 (54.22%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            D   LQD+CVA  D +    V+G  CK      ++DFF   + +  +T+N  GV  T A V   PGLNTLG+S  R D AP G
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGG 110          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.591e-27
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+E+  +++G +Y GFV S   NN + AKV+ +G++ V+P+GL+HFQ N+G   A     LNSQ PG   I   VFG+   IN + L KAF L  K +  L+ +F
Sbjct:  114 PHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAFGLSLKQIGTLKKRF 219          

HSP 2 Score: 50.8322 bits (120), Expect = 1.591e-27
Identity = 33/85 (38.82%), Postives = 38/85 (44.71%), Query Frame = 1
Query:  121 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAP 366
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKP 108          
BLAST of CK934893 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.071e-27
Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  381 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 713
            PH HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++HFQ N+G T A  Y A NS+ PG V I  TVFG+   I    L +AF L P  ++ L+ +F
Sbjct:  114 PHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAFGLTPAELRRLEKRF 219          

HSP 2 Score: 46.2098 bits (108), Expect = 2.071e-27
Identity = 29/86 (33.72%), Postives = 38/86 (44.19%), Query Frame = 1
Query:  124 DPGHLQDVCV---AINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVGETDANVEQIPGLNTLGISAFRIDYAPYG 372
            DP  +QD CV       P +   +    C+ P    A DF FSG+   GN +   G         Q PGL+TLG+S  R D +  G
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAG 109          
The following BLAST results are available for this feature:
BLAST of CK934893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL34_ORYSJ1.234e-3445.61Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL36_ORYSJ2.727e-3445.61Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ6.027e-3445.61Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ7.852e-3444.55Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ8.465e-3345.61Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ1.869e-3243.64Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GLT3_ARATH8.733e-2939.64Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL12_ORYSJ2.510e-2841.44Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH1.591e-2744.14Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL24_ORYSJ2.071e-2747.75Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934893 ID=CK934893; Name=CK934893; organism=Citrus sinensis; type=EST; length=936bp
GGGGAAAACACTTGATTAAAGTTTGAGATAGGCACATCNNNTGACTTAAT
CACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGG
CTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGT
GTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTG
CAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAG
GCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGGTGAAACAGATGCA
AATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCG
TATTGACTATGCACCATATGGCCAAAGGCACCTCACATTCACCCCCGTGC
CAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGA
CATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGA
GATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGG
AAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTG
AAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCC
GATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCT
TCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTA
ATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTAT
CATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAG
GCTGACTGTGGCCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCA
GCTAAGCCTTTTCCAAAAAAAAAAAAAAAAAAAAAA
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