CK935052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935052 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.329e-12 Identity = 54/213 (25.35%), Postives = 97/213 (45.54%), Query Frame = 2 Query: 29 YSEFRKRAREKMESSSSKYFLILLAIFYHINSSSASRNVPSK----ITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAM----AKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRGQIVKIAHMTSNALALINSYAS 640 Y + KR R + + S LI + + + S + SK + AS + +K C+ T Y C +L ++ T P L + NVT+ AK + +M L R A+ C E + ++DEL S E+G + + + +++ W+SAA++ E TC +GF+ N G+ ++ + +T N LA+I+ ++ Sbjct: 5 YDDESKRKRRYIVITISSVLLISMVVAVTVGVSLNKHDGDSKGKAEVNASVKAVKDVCAPTDYRKTCEDTLIKNGKNT-TDPMELVKTAFNVTMKQITDAAKKSQTIM-----ELQKDSRTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGNAGETMKKALKTAIELTHNGLAIISEMSN 211
BLAST of CK935052 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.551e-11 Identity = 51/197 (25.89%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 95 LLAIFYHINSSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMG------LIKASNFELTMNDIQTWVSAALTDETTCSDGFEK---------NTVNGKVVRGQIVKIAHMTSNALALINSYAS 640 ++A H N + ++ + P ++T ST +K CS T +P C S+++ S T P+ L SL V + S S + K+SK + R A++ C + + D++D L ++ + + +S E D++TW+SA +TD TC D ++ N+ + ++ + + TSN+LA+++ S Sbjct: 47 VVATVVHKNKNESTPSPPPELTPSTS-LKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDE-RIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIE----DLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILS 237 The following BLAST results are available for this feature:
BLAST of CK935052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935052 ID=CK935052; Name=CK935052; organism=Citrus sinensis; type=EST; length=778bpback to top |