CK935135

Overview
NameCK935135
Unique NameCK935135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935135 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 3 
Query:   33 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVN-APKCPHRNNHYDG 458
            EEA +       +  ++L++SI      + +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DTQ +R GPN   L  N  P+ P  NN+ DG
Sbjct:  243 EEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385
The following BLAST results are available for this feature:
BLAST of CK935135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA4.299e-1534.97Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004177_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DA0001_IIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935135 ID=CK935135; Name=CK935135; organism=Citrus sinensis; type=EST; length=819bp
GGGCTTGTGGAGTTAAGTGTTTGATAGATGATGAAGAAGCAGTAAAGGTT
GGTGGATCTAATCACAGCCACGCTACTCAGGATCTCTACGACTCAATTGC
AGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTATTGATCCCG
ATCACGAGGACCAATTTGACTTTGACCCACTGGACGTAACCAAGTGGTGG
CCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAACAA
GAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTG
GTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAATGT
CGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTA
CTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCATT
ATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTCGATTACTTT
CCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTC
TGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACA
ACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCCAGACAGGCAA
GAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACCCACGTGTCAC
CCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCGGGCCGACAGAT
CTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCCAAGCATTTTG
AAGGTGTCACTTGAACTGG
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