CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALPB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALPA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella paratyphi A GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALNS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella newport (strain SL254) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALHS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella heidelberg (strain SL476) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALG2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALEP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALDC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella dublin (strain CT_02021853) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALCH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella choleraesuis GN=fabZ PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALAR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SALA4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Salmonella agona (strain SL483) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N+ FF GHFP +PI+PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_SALPB1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALPA1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALNS1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALHS1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALG21.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALEP1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALDC1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALCH1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALAR1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SALA41.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
back to top