CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_GLOVI ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Gloeobacter violaceus GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRM-TLVKLQKRFGI----AKMEGK 840
            ++D  +I+ IL HR+PFLLVDRV+ + PGV AV IKNVTIN+ FF GHFP RP+MPG L++EAMAQVGG+V  Q PE  G        G++K RFR+ V+ GD +++    L   QKRFGI    ++++GK
Sbjct:    1 MIDNIEIQKILAHRYPFLLVDRVLVFEPGVRAVGIKNVTINEPFFQGHFPGRPLMPGALLIEAMAQVGGIVCGQLPEAVGKIP--LLVGVNKTRFRRQVVPGDQVIITAEDLRTRQKRFGIMQTRSEVDGK 129          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_MARMS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Marinomonas sp. (strain MWYL1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27
Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML-----QPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            +MD+N+IR  LPHR+PFLLVDR++E N   S +A KNVTIN+ FF GHFP  P+MPGVL++EAMAQ  G++       +PE G     ++F G D  RF++PV+ GD L +   ++  +KR GI K E +A
Sbjct:    1 MMDVNEIRQYLPHRYPFLLVDRIVEINLNDSIIAYKNVTINEPFFNGHFPNHPVMPGVLIIEAMAQAAGVLGFKSMDKKPEDGSI---YYFVGADNARFKRPVVPGDRLQLEAKII-AEKR-GIWKFECRA 126          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACA2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus amyloliquefaciens (strain FZB42) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            ++D  QI++I+PHR+PFLLVDR+ E   G  A   KNVT N++FF GHFPE P+MPGVL+VEA+AQVG + ML  E    R   FFAGID  RF+K V  GD L + + + +    + +  G+AK++G+
Sbjct:    1 MLDTQQIKEIIPHRYPFLLVDRITEVEEGKRAAGYKNVTANEDFFNGHFPEYPVMPGVLIVEALAQVGAVAMLIKEENRGR-LAFFAGIDNCRFKKQVKPGDKLELEVDITRARGTIGRGKGVAKVDGE 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ACIAD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acinetobacter sp. (strain ADP1) GN=fabZ PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27
Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV--MLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            MDI +IR+ LPHR+PFLLVDRV+E     + V  KNV+IN+ FF GHFP+ PIMPGVL+VEA+AQ+ G++  ++  E       F FAG +KVRF+K V+AGD LV++  LV +QKR GI K
Sbjct:    3 MDIQKIREYLPHRYPFLLVDRVVEVGEN-NIVGYKNVSINEEFFQGHFPDYPIMPGVLIVEALAQISGILGFIMNNETPKPGSLFLFAGAEKVRFKKQVVAGDQLVLKAELV-MQKR-GIYK 121          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPY ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pseudotuberculosis GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pestis (strain Pestoides F) GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPG ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_YERPE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Yersinia pestis GN=fabZ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP----EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            + I +I D+LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++EAMAQ  G++  +     E G   E ++FAGID+ RF++PV+ GD ++M +  VK    L +  G+AK++G+
Sbjct:    8 LHIEEILDLLPHRFPFLLVDRVLDFEEGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSRGKLEPG---ELYYFAGIDEARFKRPVVPGDQMIMEVEFVKERRGLTRFTGVAKVDGE 136          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_GLOVI1.357e-2751.91(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_MARMS1.772e-2748.85(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACA21.772e-2748.84(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ACIAD1.772e-2754.92(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPY2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPS2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPP2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPN2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPG2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_YERPE2.314e-2746.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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