CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_RHILW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGD 771
            DI +I  +LPHR+PFL+VD++IE +   SA+ IKNVT+N+  F GHFPE PIMPGVL++E MAQ  G +  + E G      +F  I+  RFRKPV+ GD
Sbjct:   13 DIIEIMKLLPHRYPFLMVDKIIEIDGDNSAIGIKNVTVNEPHFTGHFPEAPIMPGVLLIEGMAQTAGAICAKKE-GQPGNLVYFMTIENARFRKPVVPGD 111          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_WOLWR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTL 795
            +I+ I  ILPH +PFLLVDRVIE +PG S  AIKNVT N+ FF GHFP  PIMPGVL++E++AQ   + +L  E   ++   +   I+  +FRKPV  GDTL+++  +
Sbjct:    4 NISDIIKILPHSYPFLLVDRVIECDPGKSIKAIKNVTFNEPFFIGHFPGHPIMPGVLIIESLAQASAICVLGKETIENKV-VYLRSIENAKFRKPVTPGDTLILQANI 110          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_RICPR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia prowazekii GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGK 840
            ++ I +I D++PHR+PFLLVDRV++ +P  S + IKNVT+N+  F GHFP RP+MPGVLMVE+MAQ+  +++ +       +  F   I+  +FR+ V  GDT  M +  V  Q+R  + K   K
Sbjct:    2 IIAITEIMDLIPHRYPFLLVDRVLKIDPNKSIIGIKNVTVNEPQFTGHFPARPVMPGVLMVESMAQLAAILVAKSLDSTKNKEVFLMSIENTKFRRIVQPGDT--MHIHSVIDQQRANVWKFSSK 124          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_METNO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  415 DSIEDRPIELRYQAFPTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRE--NFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRF-----GIAKMEG 837
            D++ + P EL         DI ++ ++LPHR+PFLLVDR+   N   S + IKNVTIN+  F GHFP  P+ PGVL+VE MAQ  G +    ++  + +    +   IDKV+FRKPV+ GDT+   M  V   +RF     G AK+ G
Sbjct:    4 DAMTETPTELG------TADIMRVMELLPHRYPFLLVDRITAINGDDSCIGIKNVTINEPQFTGHFPAMPVFPGVLLVEGMAQTAGAICCAHKLQNNTKPSRVYLMTIDKVKFRKPVVPGDTVEYHMKKVS-NRRFMWWFRGEAKVNG 144          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ERYLH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Erythrobacter litoralis (strain HTCC2594) GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP-EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            DI Q+   LPHR+P LLVDRV   + G    A+K VT+N+ FF GHFP  PIMPGVL VEAMAQ   ++ ++  E+ G+ +  FF GI+  +FRKPV  G  L + +     QKR  + K  GKA
Sbjct:    8 DIQQVLKALPHRYPLLLVDRVKSMDLGERIHAVKGVTMNEEFFQGHFPGAPIMPGVLQVEAMAQAAAILGIETLELAGTGKLVFFMGIENAKFRKPVTPGCLLDLEVEFT--QKRSRVYKFRGKA 130          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BRASO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bradyrhizobium sp. (strain ORS278) GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN-FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRF----GIAKMEG 837
            +DIN+I   LPHR PFLL+DRV       S + +KNV+ N+  F GHFPERP+ PGVLM+E MAQ  G++ ++   G  +    +F  IDK +FRKPV+ G T+   M  +  +K      G AK++G
Sbjct:   11 IDINEILKTLPHRNPFLLIDRVKNIRADYSGIGVKNVSFNEPCFQGHFPERPVYPGVLMIEGMAQTAGVIGIKSVEGTEKPRAVYFLTIDKCKFRKPVLPGQTIEYHMRSIGRRKTMWWFHGDAKVDG 138          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_GLUOX ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Gluconobacter oxydans GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1
Query:  460 PTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            P  +DI +I   +PHR+PFLL+D+++E + G SA+ IKNVT+N+ FF GHFP  P+MPGVL+VEAMAQ    LV++        +  +F  I+  +FR+PV  GD L  R+ + K + R  + K +G A
Sbjct:   25 PQSIDILKIMQSIPHRYPFLLIDKMVEIHAGQSAIGIKNVTVNEPFFQGHFPSHPVMPGVLIVEAMAQTAATLVVMTLGKAFEGKLVYFMTIENAKFRRPVGPGDQL--RIHVDKERSRANVWKFKGVA 151          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CHLMU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chlamydia muridarum GN=fabZ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGV-SAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM-LQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIA 825
            V+ I  I+++LPHR+PFLLVD+++ Y+    S VA KNVTIN+ FF GHFPE PIMPGVL++EA+AQ  G+++ +  E    ++   F GI K +FR+PV  GD L+++     +  + G A
Sbjct:    6 VLGIQDIQNLLPHRYPFLLVDKILSYDLNTRSIVAQKNVTINEPFFVGHFPEAPIMPGVLILEALAQAAGVLLGIILENDRDKKIALFLGIQKAKFRQPVKPGDVLILKAEFSLISAKGGKA 127          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ZYMMO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Zymomonas mobilis GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP-EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            +D+ ++   LPHRFP LLVDRV    PG   VAIK VTIN+ FF GHFP  PIMPGVL+VEA+AQ  G++ ++   + G+ +  +F  I++ +FR PV  G  +++R+ +  LQKR  I K + +A
Sbjct:   14 LDVKRVMAALPHRFPMLLVDRVETLIPGEKIVAIKAVTINEPFFTGHFPGNPIMPGVLIVEALAQAAGVLAIESLGLTGTGKLVYFMAINETKFRIPVEPG--ILLRLEVEFLQKRAKICKFKARA 137          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_THICR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thiomicrospira crunogena (strain XCL-2) GN=fabZ PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML--QPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKME 834
            ++++ +I + LPHR+PFLLVDRV E+  G S  A KNVT N+  F GHFP+ PIMPGV+++EAMAQ  G++    Q         ++ A +D  RFRKP I GD L   +  V  +K  GI K E
Sbjct:    1 MLNVKEIFEYLPHRYPFLLVDRVTEFKSGESLKAYKNVTYNEPQFTGHFPDNPIMPGVMIIEAMAQCTGILAFKTQDVKPDGTSMYYLAAVDNCRFRKPAIPGDKLEFEVKTVNNKK--GIWKFE 123          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_RHILW3.458e-2352.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_WOLWR4.516e-2350.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICPR4.516e-2343.20(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_METNO4.516e-2341.89(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ERYLH4.516e-2347.20(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BRASO4.516e-2343.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GLUOX5.898e-2344.19(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CHLMU5.898e-2345.90(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ZYMMO7.703e-2346.03(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THICR7.703e-2345.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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