CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COXB1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain CbuK_Q154) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 62/130 (47.69%), Postives = 93/130 (71.54%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+D  RF++ V  GD L + + ++K+ +  G+ K EGKA
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGVDNARFKRVVEPGDQLTLEVKVLKVHR--GLWKFEGKA 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LISMH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ILPHR+PFLLVDRVI    G    AIKNVT N+ FF GHFPE P+MPGVL+VEA+AQ  G+ M+Q E    +    FAGID  RF++ V+ GD L++   + ++  R  IAK + KA
Sbjct:    1 MLDIKKIKEILPHRYPFLLVDRVISVEDGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQNEANKGKIG-LFAGIDGCRFKRQVVPGDQLLLEAEITRM--RGAIAKAKVKA 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLKLSIDLTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLKLSIDLTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLKLSIDLTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_HYDS0 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 63/128 (49.22%), Postives = 91/128 (71.09%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQP---EVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            MD+ +I  I+PHR+P LLVD+++E   G   V +KNV++N+ FF GHFP  P+MPGVLM+EAMAQVGG++M++    E+G  +    FAGID+ RF++PV  GD L+M +  + L+K   I+KM+G A
Sbjct:    1 MDVLEIMKIIPHRYPLLLVDKILEMELGKRIVGLKNVSVNEPFFQGHFPGYPLMPGVLMLEAMAQVGGILMIKSLGLEIG--KYAVVFAGIDEARFKRPVYPGDQLIMELETISLKKT--ISKMKGTA 124          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_GEOSW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Geobacillus sp. (strain WCH70) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 64/129 (49.61%), Postives = 90/129 (69.77%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            ++DI QI+ I+PHR+PFLLVDR++E   G  AV IKNV+ N++FF GHFPE P+MPGVL+VEA+AQVG + ML+ E    R   FF GID  RF+K V  GD L + + +++    + K  G+A ++G+
Sbjct:    1 MLDIQQIQAIIPHRYPFLLVDRILEIEEGKRAVGIKNVSANESFFVGHFPEYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFTGIDNCRFKKQVKPGDQLRLEVEIIRAKGPIGKGKGVATVDGE 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLRLSIELTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLRLSIELTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDVLRLSIELTKIKGVAGVGK 123          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_COXB11.602e-2847.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LISMH2.093e-2850.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBL2.093e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBH2.093e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB12.093e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_HYDS02.733e-2849.22(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GEOSW2.733e-2849.61(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBM2.733e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBJ2.733e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB62.733e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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