CK935225

Overview
NameCK935225
Unique NameCK935225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.254e-66
Identity = 113/173 (65.32%), Postives = 143/173 (82.66%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+  +P GKDY++  ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG   GK++   +INH+GEVNRARYMPQNP +IATKT S+ V VFDY+KHP+KP   G C+PDLRLRGH  EGYGLSW+
Sbjct:   14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWN 185          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.254e-66
Identity = 112/173 (64.74%), Postives = 144/173 (83.24%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+  +P GKDY++  ++LGTHTS+ E N+L++A+V +P DD++ DA H D ++ +FGGFG   GK++   +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP   G C+PDLRLRGH  EGYGLSW+
Sbjct:   14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWN 185          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.791e-64
Identity = 109/176 (61.93%), Postives = 142/176 (80.68%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            ++INEEYKIWK++TPFLYD+VITHALEWPSLTV WLP +   P K YS++K+ILGTHTS+ E NYLM+A+V LP+D++  ++  YDD + + GG G  + K++IIQ+INH+GEVNRAR MPQN  +IATKTVS+EVY+FD +KHP +P  DG CSP+L+L GH  EGYG+SW+  K
Sbjct:   11 KVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRK 186          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 7.272e-58
Identity = 104/176 (59.09%), Postives = 142/176 (80.68%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLP+ E+    D++V ++ILGTHTS+ E N+L+++++ +P D+++ DA  YD +R +FGGFG  NGKV+   +INH+GEVNRARYMPQ P +IATK+ SA+VY+FDY+K+PS P  D   +P L+L+GH+ EGYGLSW+  K
Sbjct:   12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHTVHRLILGTHTSD-EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPK-DNTFNPLLKLKGHTKEGYGLSWNPNK 184          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.498e-58
Identity = 100/185 (54.05%), Postives = 130/185 (70.27%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD---------DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            +L NEEYKIWKKN+PFLYDLV+THALEWPSLT +WLPD+E P G+ Y+  +++LGTHTS  + NYL  AQVQLP           +S  D + YD+D+ + G +     ++ I+Q+INHDGE+NRARY PQN  LIAT++V+ + Y+FD +KH + P  DG C PD+ L G   EGYGLSWS  K
Sbjct:   69 KLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQKINHDGEINRARYCPQNCDLIATRSVTGKTYIFDRTKHSNTPSADGVCRPDIILEGQHKEGYGLSWSPLK 253          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.807e-56
Identity = 102/176 (57.95%), Postives = 138/176 (78.41%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD  +    D+++ ++ILGTHTS+ E N+L+++++ +P DD++ DA  YD +RS++GGFG  NGKV+   +INH+GEVNRARYMPQ   +IATK+  A+VY+FDY KH S  P D   +P +RL+GH+ EGYGLSW+  K
Sbjct:   12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD-EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNK 184          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.412e-55
Identity = 100/178 (56.18%), Postives = 130/178 (73.03%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND----ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            INE+YK+WKKNTPFLYD VITHAL WPSLT +WLPD  + P  DY+ Q++I+GTHTS    ++L++A+V LP   +       A  YD+++ + G +  +  +++ IQ INH GEVNRARYMPQNP LIATKTV+ EVYVFD +KH SK P +G C PD+RL+G + EGYGLSW+  K
Sbjct:   25 INEQYKVWKKNTPFLYDTVITHALTWPSLTCQWLPDITDVPDTDYTSQRLIIGTHTSGQANDHLIIAEVLLPKKGAGISDKALADLYDEEKQEIGSYTASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTGEVYVFDRTKHESKAPANGECKPDIRLKGQTKEGYGLSWNALK 202          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_ASPOR (Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae GN=hat2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.725e-49
Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            ++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD++E P K YS  +++LGTHTS +  NYL +A VQLP + S  +   YD++R + GG+G ++ K        I+Q+I+H GEVN+ARY PQNP +IAT      V ++D SKHPS P   G  +P + L GH+ EG+GLSWS
Sbjct:   23 KVINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLLGTHTSSDAQNYLQIAHVQLP-NPSAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWDRSKHPSLP--TGTVNPQMELLGHTKEGFGLSWS 198          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_ASPFU (Histone acetyltransferase type B subunit 2 OS=Aspergillus fumigatus GN=hat2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49
Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            ++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD++E P K YS  ++++GTHTS +  NYL +A VQLP + S  +   YD++R + GG+G ++ K        I+Q+I+H GEVN+ARY PQNP +IAT      V V+D SKHPS P   G  +P + L GH+ EG+GLSWS
Sbjct:   23 KIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLIGTHTSSDAQNYLQIAHVQLP-NPSAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNIIATMCTDGRVMVWDRSKHPSLP--TGQVNPQMELIGHTKEGFGLSWS 198          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47
Identity = 90/180 (50.00%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG--CANG-----KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            RLINEEYKIWKKN+PFLYD++++ ALEWP+LT +W PD + P  K ++V +++LGTHT+E +PNYL +A+V++P    E + R YD++R + GG+G   ++G     + +I Q+I+H GEVN+ARY PQNP +IAT  V   V +FD +KH   P   G  SP L L GH  EG+GL+W+
Sbjct:   24 RLINEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFPDVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIP-KMVELNPRDYDEERGEIGGYGSKASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFDRTKHSITP--SGTPSPQLELIGHKEEGFGLNWN 200          
The following BLAST results are available for this feature:
BLAST of CK935225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
RBBP7_PONAB4.254e-6665.32Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
RBBP7_BOVIN4.254e-6664.74Histone-binding protein RBBP7 OS=Bos taurus GN=RBB... [more]
RBBD_DICDI6.791e-6461.93Probable histone-binding protein rbbD OS=Dictyoste... [more]
LIN53_CAEBR7.272e-5859.09Probable histone-binding protein lin-53 OS=Caenorh... [more]
HAT2_USTMA9.498e-5854.05Histone acetyltransferase type B subunit 2 OS=Usti... [more]
LIN53_CAEEL6.807e-5657.95Probable histone-binding protein lin-53 OS=Caenorh... [more]
HAT2_CRYNE4.412e-5556.18Histone acetyltransferase type B subunit 2 OS=Cryp... [more]
HAT2_ASPOR4.725e-4950.84Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
HAT2_ASPFU6.171e-4950.84Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
HAT2_NEUCR2.593e-4750.00Histone acetyltransferase type B subunit 2 OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935225 ID=CK935225; Name=CK935225; organism=Citrus sinensis; type=EST; length=835bp
GGGGAAATCTCAGATTCCGCCGCTCTCGCTTCATTTGTCGTTTTTTGGGT
TCTATTTCGTCGAGAGAAAGGGAGCAATAGGTTCATCTGCTGAGATAGAG
TTTTTGGCGCCGTTTCCTCCTCCGCTCGCCAGTTCCATTTTAATAATAAT
TTACCGTTAGGGGAAGCAAATAATTGTAAAAGCAGATGAATGGAGTTGCA
TCTACCTCAGTTGCAGAAGTAGGACTTTGGCGGCAACAAAACTTAAGAAA
TTGAGCGAAGAGCAATGGGAAAAGACGAGGAAGAGATGAGGGGAGAGATA
GAAGAGAGGTTGATAAATGAAGAATACAAGATTTGGAAGAAGAACACTCC
GTTTCTGTATGATCTTGTCATCACACATGCCCTTGAATGGCCTTCTCTGA
CTGTTGAGTGGTTGCCTGATAGAGAAGAACCCCCTGGCAAAGACTATTCT
GTTCAGAAAATGATCCTTGGGACACACACATCTGAGAATGAGCCCAACTA
TCTCATGCTTGCTCAGGTCCAGCTTCCTCTTGATGACTCAGAGAATGATG
CCCGCCATTACGATGATGACCGCTCTGATTTTGGTGGCTTTGGCTGTGCC
AATGGCAAGGTGCAAATAATTCAGCAAATAAACCATGATGGAGAGGTTAA
CCGGGCCCGTTATATGCCTCAGAATCCGTTTCTTATTGCCACGAAGACTG
TTAGTGCTGAGGTCTATGTTTTTGATTATAGCAAACACCCTTCTAAACCT
CCTCTGGATGGTGCATGTAGTCCTGATCTGAGGCTGAGGGGCCATAGCAC
TGAAGGATACGGCTTATCGTGGAGCAAGTTCAAGG
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