CK935225

Overview
NameCK935225
Unique NameCK935225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_SCHPO (Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe GN=mis16 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.060e-45
Identity = 88/179 (49.16%), Postives = 118/179 (65.92%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDF------GGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            + I EEYK+WK+N PFLYDLVITHALEWPSLT++WLPD++  PG DYS+Q++ILGTHTS N+ NYL +A VQLP         ++D+D ++F            +  ++I Q+I HDG+VNRARYMPQ P +IAT       Y+FD + H +     G   P   L+GH+ EG+GL W+
Sbjct:   24 KTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLP---------NFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDAL--TTGEALPQAVLKGHTAEGFGLCWN 191          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_GIBZE (Histone acetyltransferase type B subunit 2 OS=Gibberella zeae GN=HAT2 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.221e-45
Identity = 85/177 (48.02%), Postives = 117/177 (66.10%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            RLINEEYK WKKN+PFL       AL WP+LTV+W PD +EP GK+Y + +++LGTHTS+  PNYL +A VQ+P   + N    YD++R + GG+G +      K  I+Q+I H GEVN+ARY PQNP ++AT  V  ++ +FD +KHP  P   G  +  + L GH  EG+GL+W+
Sbjct:   16 RLINEEYKTWKKNSPFLT------ALTWPTLTVQWFPDVKEPEGKNYKIHRLLLGTHTSDESPNYLQIADVQIPKVVAPNPD-DYDEERGEIGGYGKSGDVAAIKCDIVQRIEHPGEVNKARYQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWN 185          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.573e-44
Identity = 84/171 (49.12%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  316 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            ++E++IWKKN P+LYD V+T  +EWPSL+V+W+PD  +    D S+ +MI GTHT     N+LM+++  +  D  E D   +D +R +FGG+G  +  K     +INH GEV+RARYMP NPF+IA++  S +VY+FDY+KHPS+P  D    P LRL+GH  EGYG+SWS
Sbjct:   11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK-DTKFRPQLRLKGHEGEGYGMSWS 180          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.511e-42
Identity = 88/176 (50.00%), Postives = 113/176 (64.20%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            + EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P    P  KD  ++V K+ILGTHTS    ++LM+A V +P  D+E      D +            KV+I Q+I  DGEVNRAR MPQ P L+  KT  +EV++FDY++   KP     C PDLRL GH  EGYGL+WS FK
Sbjct:   15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQ-TSECDPDLRLMGHEQEGYGLAWSSFK 181          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.283e-42
Identity = 91/181 (50.28%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-----GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            + E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P    P   D  + V K+ILGTHTS +  ++LM+A V  P  ++E              G G AN      KV+I Q+I  DGEVNRAR MPQ P L+  KT   EV++FDY+KH +K      C PDLRL GH  EGYGLSWS FK
Sbjct:   14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE-------------PGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQ-TSECDPDLRLVGHDKEGYGLSWSPFK 180          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.607e-34
Identity = 73/176 (41.48%), Postives = 112/176 (63.64%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSE---NDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK 828
            I+E++  WKKN+  LY+L+IT  L WPSL+++WL   E    K     +++LGTH +E  PN+L LA + LP D ++   +  +HY++D  + GG+   +  K QI Q+I H+G+VNR R+MPQNP +IAT +     Y+FD +K+ S P  +    P++ L GH  EG+GLSW++
Sbjct:   20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLP-DFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEE--FLPNISLIGHKKEGFGLSWNR 192          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_ENCCU (Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi GN=HAT2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.131e-33
Identity = 74/177 (41.81%), Postives = 116/177 (65.54%), Query Frame = 1
Query:  307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPD--REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP--LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            +++NEEYKIWKKN P+LYDL+ +H LEWPSL+V+W PD  R+E  G+  + Q+++L THTS +E  Y+++A+V+ P   D+S N+         + GG    + +++IIQ+I+   E NR RY P    ++A ++   +++V+DY+KH S   +     PD+ LRGHS  G+GLSW+
Sbjct:    9 KIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGR--TTQRLLLSTHTSGSEEEYILIAKVEFPDEFDESLNE---------EVGG----DMRLKIIQRISIMDEANRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIP---RPDMVLRGHSAGGFGLSWN 167          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_CANGA (Histone acetyltransferase type B subunit 2 OS=Candida glabrata GN=HAT2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.520e-28
Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            ++EEY++WK N P LYD V    L WP+LTVEWLP +     +  + Q++ILGTHTS  E NYL +  V LP++ +EN  +  + D  D          V+I+++  HDGE+ RARYMPQ+  +IAT     +++++D SK+  +  L         L  H+  GYGL+++
Sbjct:   30 VDEEYELWKSNVPMLYDFVSETRLTWPTLTVEWLPQKNLVAAR--TRQQLILGTHTSGEEQNYLKIGAVDLPVEVTENSKKDREIDEED---EDMVLSNVKIVKKFPHDGEITRARYMPQDDNIIATINGEGKIFIYDRSKNGVEALLS-------TLEYHTENGYGLAFN 188          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.523e-26
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP---PGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825
            INEEY +W  N P +YD V    L WPSLTV+WLP   +P    G+    Q++++GT T++NEPNYL +A + LP + + +     DD + +         K++I+++  H+ EV RARYMPQ+P +IAT   +  VY+FD +    K    GA +       H   GYGL+++
Sbjct:   13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAIA---SFSYHKENGYGLAFN 178          
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: HAT2_DEBHA (Histone acetyltransferase type B subunit 2 OS=Debaryomyces hansenii GN=HAT2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.758e-25
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = 1
Query:  313 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834
            I EEY++W+KN  ++Y+ V   AL WPSLT++WLP+ +    +     K++LGTHTS  + NYL LA  Q+PL +S N      +++S+         +++I ++  ++ E+NRARYMPQ+P +++T   + E+ +++              +       H   GYGLSWS  K
Sbjct:   21 IKEEYQLWRKNCRYMYEFVSETALTWPSLTIQWLPENKTNEAEGLIDAKLLLGTHTSGEDTNYLKLASTQIPLSNSSN-----TEEKSN----KKVTSRIKITKKFENNFEINRARYMPQDPSIVSTINGAGEIDLYNLGGDQK--------TAIAHFTPHEDNGYGLSWSPHK 177          
The following BLAST results are available for this feature:
BLAST of CK935225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
HAT2_SCHPO7.060e-4549.16Histone acetyltransferase type B subunit 2 OS=Schi... [more]
HAT2_GIBZE9.221e-4548.02Histone acetyltransferase type B subunit 2 OS=Gibb... [more]
RBA1_CAEEL1.573e-4449.12Probable histone-binding protein rba-1 OS=Caenorha... [more]
MSI3_ARATH2.511e-4250.00WD-40 repeat-containing protein MSI3 OS=Arabidopsi... [more]
MSI2_ARATH4.283e-4250.28WD-40 repeat-containing protein MSI2 OS=Arabidopsi... [more]
YEC6_SCHPO5.607e-3441.48Uncharacterized WD repeat-containing protein C25H1... [more]
HAT2_ENCCU2.131e-3341.81Histone acetyltransferase type B subunit 2 OS=Ence... [more]
HAT2_CANGA3.520e-2838.60Histone acetyltransferase type B subunit 2 OS=Cand... [more]
HAT2_KLULA2.523e-2637.93Histone acetyltransferase type B subunit 2 OS=Kluy... [more]
HAT2_DEBHA4.758e-2533.91Histone acetyltransferase type B subunit 2 OS=Deba... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935225 ID=CK935225; Name=CK935225; organism=Citrus sinensis; type=EST; length=835bp
GGGGAAATCTCAGATTCCGCCGCTCTCGCTTCATTTGTCGTTTTTTGGGT
TCTATTTCGTCGAGAGAAAGGGAGCAATAGGTTCATCTGCTGAGATAGAG
TTTTTGGCGCCGTTTCCTCCTCCGCTCGCCAGTTCCATTTTAATAATAAT
TTACCGTTAGGGGAAGCAAATAATTGTAAAAGCAGATGAATGGAGTTGCA
TCTACCTCAGTTGCAGAAGTAGGACTTTGGCGGCAACAAAACTTAAGAAA
TTGAGCGAAGAGCAATGGGAAAAGACGAGGAAGAGATGAGGGGAGAGATA
GAAGAGAGGTTGATAAATGAAGAATACAAGATTTGGAAGAAGAACACTCC
GTTTCTGTATGATCTTGTCATCACACATGCCCTTGAATGGCCTTCTCTGA
CTGTTGAGTGGTTGCCTGATAGAGAAGAACCCCCTGGCAAAGACTATTCT
GTTCAGAAAATGATCCTTGGGACACACACATCTGAGAATGAGCCCAACTA
TCTCATGCTTGCTCAGGTCCAGCTTCCTCTTGATGACTCAGAGAATGATG
CCCGCCATTACGATGATGACCGCTCTGATTTTGGTGGCTTTGGCTGTGCC
AATGGCAAGGTGCAAATAATTCAGCAAATAAACCATGATGGAGAGGTTAA
CCGGGCCCGTTATATGCCTCAGAATCCGTTTCTTATTGCCACGAAGACTG
TTAGTGCTGAGGTCTATGTTTTTGATTATAGCAAACACCCTTCTAAACCT
CCTCTGGATGGTGCATGTAGTCCTGATCTGAGGCTGAGGGGCCATAGCAC
TGAAGGATACGGCTTATCGTGGAGCAAGTTCAAGG
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