CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 81/186 (43.55%), Postives = 112/186 (60.22%), Query Frame = 1
Query:  298 VGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQ-SVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN-NFGCEGGLLFY 849
            + ++ ++L S D L  L+E W   H  + +  +EK  R  +FK+N+K I   N++    + Y L LN+F DM+++EF++KY  G K                     +Y+NV  LP  S+DWR KGAVT VK+Q  CG CWAFS +A+VEGINQI TG L +LSEQEL+ CDT+ N GC GGL+ Y
Sbjct:   23 IPFTEKDLASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKD--APYKLALNKFGDMTNQEFRSKY-AGSK----IQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDY 200          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 80/166 (48.19%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  346 LFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            +FESWM+KHGK Y+S  EK  RL IF+DNL+ I  RN E     SY LGLN F+D+S  E+  +   G  P                     YK  +   LP+SVDWR +GAVT VK+Q  C  CWAFS V AVEG+N+IVTG L  LSEQ+L++C+  N GC GG
Sbjct:   55 MFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAE---NLSYRLGLNRFADLSLHEY-GEICHGADPRPPRNHVFMTSSNR-------YKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGG 209          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.708e-33
Identity = 81/183 (44.26%), Postives = 105/183 (57.38%), Query Frame = 1
Query:  304 YSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN-NFGCEGGLLFY 849
            +  +EL S + L  L+E W   H  S  S  EK  R  +FK N  H+   N+   +   Y L LN+F+DM++ EF+N Y +G K                     +Y+ V+ +P SVDWRKKGAVT VK+Q  CG CWAFS + AVEGINQI T  L +LSEQEL+ CDT+ N GC GGL+ Y
Sbjct:   23 FHEKELESEESLWGLYERWRSHHTVS-RSLHEKQKRFNVFKHNAMHVHNANK---MDKPYKLKLNKFADMTNHEFRNTY-SGSK----VKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDY 196          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.708e-33
Identity = 77/178 (43.26%), Postives = 103/178 (57.87%), Query Frame = 1
Query:  313 EELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVT-HVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGG 837
            E   +  +++ ++E W++++GK+Y    EK  R +IFKDNLK I+  N +     SY  GLN+FSD++ +EF+  YL G                        YK  + LP  VDWR++GAV   VK Q  CG CWAF+A  AVEGINQI TG L +LSEQEL+ CD   +NFGC GG
Sbjct:   29 ESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPN--RSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQ---------YKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGG 195          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = 1
Query:  298 VGYSPEELT--STDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGLL 843
            + ++ + LT  + D++  ++ESW++K+GKSY S  E   R EIFK+ L+ ID  N +     SY +GLN+F+D++ EEF++ YL                              + LP  VDWR  GAV  +K+Q  CGGCWAFSA+A VEGIN+IVTG L +LSEQEL+ C    N  GC GG +
Sbjct:   23 LAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTN--RSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVG----------QVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYI 196          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.403e-32
Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = 1
Query:  298 VGYSPEELT--STDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGLL 843
            + ++ + LT  + D++  ++ESW++K+GKSY S  E   R EIFK+ L+ ID  N +     SY +GLN+F+D++ EEF++ YL                              + LP  VDWR  GAV  +K+Q  CGGCWAFSA+A VEGIN+IVTG L +LSEQEL+ C    N  GC GG +
Sbjct:   23 LAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNAD--TNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVG----------QVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYI 196          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32
Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 1
Query:  346 LFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN--NFGCEGGLLFY 849
            ++E W++++ K+Y    EK  R +IFKDNLK +D  N     T  + +GL  F+D+++EEF+  YL                         LYK  + LP  VDWR  GAV  VK+Q  CG CWAFSAV AVEGINQI TG L +LSEQEL+ CD    N GC+GG++ Y
Sbjct:   43 MYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRT--FEVGLTRFADLTNEEFRAIYLR---------KKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNY 201          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.193e-31
Identity = 80/181 (44.20%), Postives = 102/181 (56.35%), Query Frame = 1
Query:  304 YSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD-TNNFGCEGGLL 843
            +  ++L S + L +L+E W   H  S  S  EK  R  +FK NL H+   N+   +   Y L LN+F+DM++ EF++ Y  G K                     +Y+ V  +P SVDWRKKGAVT VK+Q  CG CWAFS V AVEGINQI T  L ALSEQEL+ CD   N GC GGL+
Sbjct:   25 FHDKDLASEESLWDLYERWRSHHTVS-RSLGEKHKRFNVFKANLMHVHNTNK---MDKPYKLKLNKFADMTNHEFRSTY-AGSK----VNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLM 196          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.471e-31
Identity = 69/170 (40.59%), Postives = 105/170 (61.76%), Query Frame = 1
Query:  328 TDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            +D +++ FE WM ++G+ Y+  +EK+ R +IFK+N+ HI+  N   +  +SY LG+N+F+DM++ EF  +Y TGL                         ++  +PQS+DWR  GAVT VKNQ  CG CWAF+++A VE I +I  GNL +LSEQ++L C   ++GC+GG
Sbjct:   30 SDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNN--RNGNSYTLGINQFTDMTNNEFVAQY-TGLSLPLNIKREPVVSFDDV--------DISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAV-SYGCKGG 187          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.010e-30
Identity = 77/181 (42.54%), Postives = 102/181 (56.35%), Query Frame = 1
Query:  304 YSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD-TNNFGCEGGLL 843
            +  ++L S + L +L+E W   H  S  S  EK  R  +FK N+ H+   N+   +   Y L LN+F+DM++ EF++ Y  G K                     +Y+ V  +P SVDWRKKGAVT VK+Q  CG CWAFS + AVEGINQI T  L +LSEQEL+ CD   N GC GGL+
Sbjct:   25 FHEKDLESEESLWDLYERWRSHHTVS-RSLGEKHKRFNVFKANVMHVHNTNK---MDKPYKLKLNKFADMTNHEFRSTY-AGSK----VNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLM 196          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP_HEMSP2.174e-3343.55Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR4_ARATH2.174e-3348.19Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CYSEP_RICCO3.708e-3344.26Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CPR2_ARATH3.708e-3343.26Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
ACTN_ACTCH1.840e-3241.40Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ACTN_ACTDE2.403e-3241.40Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CPR1_ARATH3.139e-3244.12Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSEP_PHAVU1.193e-3144.20Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
ANAN_ANACO3.471e-3140.59Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CYSEP_VIGMU1.010e-3042.54Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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