CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26
Identity = 70/167 (41.92%), Postives = 89/167 (53.29%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGA-VTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGL 840
            F+SWM KH K+Y STEE  HRL+ F  N + I+A N       ++ + LN+FSDMS  E K+KYL                           +     P SVDWRKKG  V+ VKNQ  CG CW FS   A+E    I TG + +L+EQ+L+ C  D NN GC+GGL
Sbjct:   35 FKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNG---NHTFKMALNQFSDMSFAEIKHKYLWS------------EPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGL 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.179e-25
Identity = 72/183 (39.34%), Postives = 99/183 (54.10%), Query Frame = 1
Query:  301 GYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGA-VTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGL 840
            G S   ++S +KL   F+SWM++H K Y S EE  HRL++F  N + I+A N       ++ LGLN+FSDMS +E ++KYL                           +     P S+DWRKKG  V+ VKNQ  CG CW FS   A+E    I TG + +L+EQ+L+ C  + NN GC+GGL
Sbjct:   21 GASNLAVSSFEKLH--FKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKINAHNAG---NHTFKLGLNQFSDMSFDEIRHKYLWS------------EPQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGL 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25
Identity = 66/167 (39.52%), Postives = 88/167 (52.69%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKG-AVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGL 840
            F SWM +H K+Y S E   HRL++F +N + I A N   Q   ++ +GLN+FSDMS  E K+KYL                           +     P S+DWRKKG  V+ VKNQ  CG CW FS   A+E    I +G +  L+EQ+L+ C  + NN GC+GGL
Sbjct:   33 FTSWMKQHQKTYSSREYS-HRLQVFANNWRKIQAHN---QRNHTFKMGLNQFSDMSFAEIKHKYLWS------------EPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGL 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 70/190 (36.84%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  301 GYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC---------DTNNFGCEGGLL 843
            G  P+ LTS D     F  +  K GK Y S EE  +R  +FK NL+    R+++L  ++++  G+ +FSD++  EF+ K+L G++                          E+LP+  DWR  GAVT VKNQ  CG CW+FSA  A+EG N + TG L +LSEQ+L+ C         D+ + GC GGL+
Sbjct:   39 GAEPQVLTSEDH----FSLFKRKFGKVYASNEEHDYRFSVFKANLRRA-RRHQKLDPSATH--GVTQFSDLTRSEFRKKHL-GVRSGFKLPKDANKAPILP---------TENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLM 211          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24
Identity = 71/182 (39.01%), Postives = 94/182 (51.65%), Query Frame = 1
Query:  307 SPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            SPEE+  T      +E W   H K Y S  +++ R  I++ NLK I A N E  +   +Y L +N   DM+ EE   K +TGL+                     LY    +  +P S+D+RKKG VT VKNQ  CG CWAFS+  A+EG  +  TG L ALS Q L+ C T N+GC GG +
Sbjct:   17 SPEEMLDTQ-----WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLR----------IPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 67/167 (40.12%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLLFY 849
            F  WM+ H KSY S EE   R  IFK N+ ++   N +    S   LGLN F+D+++EE++N YL G K                               S DWR +GAVT VKNQ  CGGCW+FS   + EG +    G L +LSEQ L+ C T N GC+GGL+ Y
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSK---GSETVLGLNNFADITNEEYRNTYL-GTKFDASSLIGTQEEKVF----------TTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTENSGCDGGLMTY 181          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24
Identity = 68/180 (37.78%), Postives = 91/180 (50.56%), Query Frame = 1
Query:  307 SPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITS-SYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            SPEE   T      +E W   HGK Y S  +++ R  I++ NLK I   N E  + + +Y L +N   DM+ EE   K +TGL+                            +P S+D+RKKG VT VKNQ  CG CWAFS+  A+EG  +  TG L ALS Q L+ C + N+GC GG +
Sbjct:   17 SPEETLDTQ-----WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQK-MTGLRVPPSRSFSNDTLYTPEWEGR--------VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.561e-23
Identity = 65/170 (38.24%), Postives = 91/170 (53.53%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDL---PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            F  W LK  + Y S+E   +R  IFK N+ ++D  N +    S   LGLN F+D+++EE++  YL G +                        NVEDL   P+S+DWR K AVT +K+Q  CG CW+FS   + EG + + T  L +LSEQ L+ C     NFGC+GGL+
Sbjct:   36 FTEWTLKFNRQYSSSEFS-NRYSIFKSNMDYVDNWNSKGD--SQTVLGLNNFADITNEEYRKTYL-GTRVNAHSYNGYDGREVL---------NVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLM 192          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.663e-23
Identity = 67/179 (37.43%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   + K Y S  +++ R  I++ NLKHI   N E  +   +Y L +N   DM+ EE   K +TGLK                             P S+D+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N+GC GG +
Sbjct:   18 PEEILDTQ-----WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKVPPSRSHSNDTLYIPDWEGRT--------PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = 1
Query:  346 LFESWMLKHGKSYESTEEKLHRLEIFKDNLKHI---DARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            LFE +   +G++YE+  E+  RL  F+ NL+ +    ARN   Q       G+ +F D+S  EF  +YL G                          ++  +P +VDWR+KGAVT VK+Q  CG CWAFSAV  +EG   +    L +LSEQ+L+SCD  N GC+GGL+
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQF------GITKFFDLSEAEFAARYLNGAA------YFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLM 193          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATH_HUMAN5.734e-2641.92Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATH_PIG2.179e-2539.34Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_RAT8.280e-2539.52Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
RD19A_ARATH1.081e-2436.84Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CATK_MOUSE1.845e-2439.01Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP5_DICDI3.146e-2440.12Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATK_RAT5.367e-2437.78Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CYSP2_DICDI1.561e-2338.24Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATK_RABIT2.663e-2337.43Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
LMCPB_LEIME3.479e-2337.87Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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