CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = 1
Query:  346 LFESWMLKHGKSYESTEEKLHRLEIFKDNLKHI---DARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            LFE +   +G++YE+  E+  RL  F+ NL+ +    ARN   Q       G+ +F D+S  EF  +YL G                          ++  +P +VDWR+KGAVT VK+Q  CG CWAFSAV  +EG   +    L +LSEQ+L+SCD  N GC+GGL+
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQF------GITKFFDLSEAEFAARYLNGAA------YFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLM 193          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23
Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 1
Query:  322 TSTDKLVEL-----FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG--NLTALSEQELLSCDTN--NFGCEGGLL 843
            T+  +L EL     F +WM+ H + Y S+EE   R  IFK N+ +I+  N +    S   LGLN F+D+++EE++  YL                         ++  V+    SVDWR KGAVT +KNQ  CGGCW+FSA  A EG   I  G  +LT++SEQ+L+ C  +  N GCEGGL+
Sbjct:   16 TAKQQLSELQYRNAFTNWMIAHQRHY-SSEEFNGRFNIFKANMDYINEWNTK---GSETVLGLNVFADITNEEYRATYL---------GTPFDASSLEMTPSEKVFGGVQ--ANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23
Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 1
Query:  313 EELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL--QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT--NNFGCEGGLL 843
            + ++  D + E + ++ L+H K+Y +  E+  R++IF +N +H  A++ +L  Q   SY LGLN+++DM H EFK + + G                        +  V   P+SVDWR+ GAVT VK+Q  CG CWAFS+  A+EG +    G L +LSEQ L+ C T   N GC GGL+
Sbjct:   16 QAISPLDLIKEEWHTYKLQHRKNYANEVEERFRMKIFNEN-RHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFK-ETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV---PKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLM 191          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23
Identity = 62/169 (36.69%), Postives = 95/169 (56.21%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITS-SYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQS--VDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNF---GCEGG 837
            +E +  K G+ Y   EE+ +RL +F DNL++I+  N++ +    +Y L +N+FSDM++E+F N  + G K                     ++ + +  P+S  VDWR KGAVT VK+Q  CG CWAFS    +EG + + TG L +LSEQ+L+ C   ++   GC GG
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-NAVMKGYKKGPRPAA--------------VFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGG 173          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23
Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKG-AVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT--NNFGCEGGL 840
            F+SWM +H K+Y S E   HRL++F +N + I A N   Q   ++ + LN+FSDMS  E K+K+L                           +     P S+DWRKKG  V+ VKNQ  C  CW FS   A+E    I +G + +L+EQ+L+ C    NN GC+GGL
Sbjct:   33 FKSWMKQHQKTYSSVEYN-HRLQMFANNWRKIQAHN---QRNHTFKMALNQFSDMSFAEIKHKFLWS------------EPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGL 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23
Identity = 67/170 (39.41%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDL-PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGL 840
            K+  LF+ +M  + ++YES EE   RL +F  N+  I A+  +     +   G+ +FSD++ EEF   YL  L                        K++ DL P   DWRKKGAVT VKNQ  CG CWAFS    VEG   +  G L +LSEQELL CD  +  C GGL
Sbjct:  160 KMAPLFKDFMTTYNRTYESREEAQWRLTVFARNM--IRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPA------------KSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL 315          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23
Identity = 63/166 (37.95%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGL 840
            F  + +++GKSYES  E   R  IF ++L+ + + NR+      Y LG+N FSDMS EEF+   L   +                     L ++   LP++ DWR+ G V+ VKNQ  CG CW FS   A+E      TG   +LSEQ+L+ C    NNFGC GGL
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRK---GLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNH-----------LMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGL 212          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 1
Query:  643 PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            P+S+DWR+KGAVT VKNQNPCG CWAFS VA +EGIN+I+TG L +LSEQELL C+  + GC+GG
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYRSHGCDGG 66          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVED-LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            FE++++ + K Y  T+ K +R +IFK NL+ I+ +N+   +  S    +N+FSD+S  E   KY TGL                         +V D LPQ+ DWR    +T VK+Q  CG CWA +AV  +E +  I    L  LSEQ+L+ CD+ N  C+GGL+
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNK---LNDSAIYNINKFSDLSKNELLTKY-TGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMACDGGLM 193          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  640 LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            LP S+DWR+KGAV  VKNQ  CG CWAF A+AAVEGINQIVTG+L +LSEQ+L+ C T N GCEGG
Sbjct:    3 LPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTRNHGCEGG 68          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP2_LEIPI3.479e-2337.87Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP6_DICDI4.543e-2338.80Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATL_SARPE4.543e-2337.02Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP1_HOMAM7.749e-2336.69Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATH_MOUSE7.749e-2337.72Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATF_MOUSE7.749e-2339.41Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
ALEU_HORVU7.749e-2337.95Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
MEX1_JACME1.012e-2269.23Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATV_NPVAH1.012e-2236.14Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CPGP1_ZINOF1.322e-2271.21Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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