CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 68/179 (37.99%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   H K Y S  +++ R  I++ NLK+I   N E  +   +Y L +N   DM++EE   K +TGLK                             P SVD+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   18 PEEILDTH-----WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQK-MTGLKVPASHSRSNDTLYIPDWEGRA--------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 68/179 (37.99%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   H K Y S  +++ R  I++ NLK+I   N E  +   +Y L +N   DM++EE   K +TGLK                             P SVD+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   18 PEEILDTH-----WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQK-MTGLKVPASHSRSNDTLYIPDWEGRA--------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 67/193 (34.72%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  265 RGHEYDGEFSIVGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDL-PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGL 840
            R   +    S++   P       K+  +F+++++ + ++YES EE   RL +F +N+          + T+ Y  G+ +FSD++ EEF+  YL  L                        K+V DL P   DWR KGAVT VK+Q  CG CWAFS    VEG   +  G L +LSEQELL CD  +  C GGL
Sbjct:  159 RNETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQY--GVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQA------------KSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL 337          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.726e-22
Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   + K Y S  +++ R  I++ NLKHI   N E  +   +Y L +N   DM+ EE   K +TGLK                             P SVD+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   18 PEEILDTQ-----WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKVPASRSRSNDTLYIPDWEGRA--------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22
Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 1
Query:  643 PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            P+S+DWR KGAVT VKNQNPCG CWAFS VA VEGIN+I TG L +LSEQELL CD  + GC+GG
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRRSHGCKGG 66          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22
Identity = 67/179 (37.43%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   + K Y S  +++ R  I++ NLKHI   N E  +   +Y L +N   DM+ EE   K +TGLK                             P S+D+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   19 PEEILDTQ-----WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKVPPSHSRSNDTLYIPDWEGRT--------PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22
Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      ++ W   + K Y S  ++L R  I++ NLKHI   N E  +   +Y L +N   DM+ EE   K +TGLK                             P SVD+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   19 PEEILDTQ-----WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKVPPSHSRSNDTLYIPDWESRA--------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.846e-22
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1
Query:  634 EDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            +DLP S+DWR+ GAV  VKNQ  CG CWAFS VAAVEGINQIVTG+L +LSEQ+L+ C T N GC GG
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGG 68          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22
Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC---------DTNNFGCEGGLL 843
            F S++ + GKSY+  +E  +RL +FKDNL+   AR  +L +  S   G+ +FSD++  EF+  YL GL+                          + LP   DWR  GAV  VKNQ  CG CW+FSA  A+EG + + TG L  LSEQ+ + C         D+ + GC GGL+
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRR--ARRHQL-LDPSAEHGVTKFSDLTPAEFRRTYL-GLRKSRRALLRELGESAHEAPVLP----TDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22
Identity = 66/167 (39.52%), Postives = 84/167 (50.30%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            ELF  +++K+ K Y+  +EK  R EIFK NL  I+ARN    +  S    +N  +D+S  E   K LTGLK                         V   P S DWR + +VT VK Q  CG CWAFSAVA +E +  I       LSEQ+L+ CD  N GC GGL+
Sbjct:   41 ELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNA---LEDSAMFEINSRADISSNELLQK-LTGLKLSLMRGEKKNSFCTPTVISGDSSGKV---PDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLM 200          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_MACMU1.322e-2237.99Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.322e-2237.99Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATF_HUMAN1.322e-2234.72Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATK_BOVIN1.726e-2237.99Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
MEX2_JACME2.255e-2272.31Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATK_PIG2.255e-2237.43Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA2.255e-2237.99Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CPGP2_ZINOF3.846e-2269.12Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSP1_MAIZE5.023e-2236.78Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATV_GVXN5.023e-2239.52Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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