CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22
Identity = 67/179 (37.43%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            PEE+  T      +E W   H K Y +  +++ R  I++ NLK+I   N E  +   +Y L +N   DM+ EE   K +TGLK                             P SVD+RKKG VT VKNQ  CG CWAFS+V A+EG  +  TG L  LS Q L+ C + N GC GG +
Sbjct:   18 PEEILDTH-----WELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKVPLSHSRSNDTLYIPEWEGRA--------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYM 182          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22
Identity = 64/169 (37.87%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG--NLTALSEQELLSCDTN--NFGCEGGLL 843
            F +WM+ H + Y S+EE   R  IFK N+ +++  N +    S   LGLN F+D+S+EE++  YL                             + D    VDWR +GAVT +KNQ  CGGCW+FS   A EG   +  G  NL +LSEQ L+ C  +  N GCEGGL+
Sbjct:   30 FTNWMIAHQRHY-SSEEFNGRYNIFKANMDYVNEWNTK---GSETVLGLNVFADISNEEYRATYL-------------GTPFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLM 181          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 1
Query:  310 PEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD---------TNNFGCEGGLL 843
            P+ L+S D     F  +  K GK Y S EE  +R  +FK NL     R++++  ++ +  G+ +FSD++  EF+ K+L G+K                          ++LP+  DWR +GAVT VKNQ  CG CW+FS   A+EG + + TG L +LSEQ+L+ CD         + + GC GGL+
Sbjct:   39 PKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRA-MRHQKMDPSARH--GVTQFSDLTRSEFRRKHL-GVKGGFKLPKDANQAPILP---------TQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLM 208          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 63/166 (37.95%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSC--DTNNFGCEGGL 840
            F  + ++H K Y+S EE   R EIF DNLK I + NR+     SY LG+NEF+D++ +EF+   L   +                            LP++ DWRK G V+ VK Q  CG CW FS   A+E       G   +LSEQ+L+ C    NNFGC GGL
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRK---GLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLKLTNVV------------LPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGL 207          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21
Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGL 840
            F  + +++GKSYES  E   R  IF ++L+ + + NR+     SY LG+N F+DMS EEF+   L   +                     +      LP++ DWR+ G V+ VKNQ  CG CW FS   A+E      TG   +LSEQ+L+ C    NNFGC GGL
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRK---GLSYRLGINRFADMSWEEFRATRLGAAQ----------NCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGL 211          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21
Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++ K  K+Y S  EKLHR +IF+ NL+ I  +N+    T+ Y   +N+FSD+S EE  +KY TGL                      L +  +  P   DWR+   VT VKNQ  CG CWAF+ + ++E    I    L  LSEQ+ + CD  N GC+GGLL
Sbjct:   23 KAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQN-DSTAQY--EINKFSDLSKEEAISKY-TGLS--------LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNAGCDGGLL 180          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21
Identity = 61/166 (36.75%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGL 840
            E +  + LK+ K Y  TE+++ R  IFK N+  + A+  ++ +  S   G+  +SD++ +EF   +LT                        L K V ++P++ DWR+KGAVT VKNQ  CG CWAFS    VE      TG L +LSEQ+L+ CD  + GC GGL
Sbjct:   18 EKYVQFKLKYRKQYHETEDEI-RFNIFKSNI--LKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTA---------SWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGL 171          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 1
Query:  295 IVGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            +V  +   L + + L   F  +  KHG+ YES  E+  RL +F++NL                  G+  FSD++ EEF+++Y  G                       +   V   P +VDWR +GAVT VK+Q  CG CWAFSA+  VE    +    LT LSEQ L+SCD  + GC GGL+
Sbjct:   20 LVPAATASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLF---LARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAA---------HFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLM 190          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 63/172 (36.63%), Postives = 92/172 (53.49%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWL-GLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLLFY 849
            ELF+++ +K+ K+Y S EE+  +LE FK+NLK I+ +N    + S Y +  +NE+SD++    KN  L                         + K+     LP+++DWR K  VT VKNQ  CG CWAFS +A +E +  I       LSEQ L++CD  N GC GGL+ +
Sbjct:   30 ELFKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKN----MASKYAVFDINEYSDLN----KNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCDNINNGCAGGLMHW 193          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 66/187 (35.29%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  298 VGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLLFY 849
            +G +   LT    L   +  W   H + Y   EE   R  +++ N+K I+  N+E  Q   S+ + +N F DM+ EEF+ + + G +                           + P+SVDWR+KG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+ Y
Sbjct:   12 LGIASATLTFNHSLEAQWTKWKAMHNRLYGMNEEGWRRA-VWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFR-QVMNGFQNRKPRKGKVFQEPLFY-----------EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDY 185          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_HUMAN5.023e-2237.43Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CYSP7_DICDI6.560e-2237.87Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
A494_ARATH6.560e-2234.76Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP3_SOLLC8.568e-2237.95Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CYSP2_MAIZE1.119e-2137.35Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATV_NPVOP1.119e-2138.24Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATL_SCHMA1.119e-2136.75Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CYSP_TRYCR1.461e-2134.43Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_GVCP1.461e-2136.63Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATL1_CERAE1.461e-2135.29Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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