CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query:  640 LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLLFY 849
            LP+ +DWRKKGAVT VKNQ  CG CWAFS V+ VE INQI TGNL +LSEQEL+ CD  N GC GG   +
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVF 70          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 61/171 (35.67%), Postives = 89/171 (52.05%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYW--LGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVE----DLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            F ++  K+GK Y+  +E+  R   F++N++       ++Q  ++ +   G+  FSDM+ EEF+ +Y  G                       L K V       P +VDWR+KGAVT VK Q  CG CWAFS +  +EG  Q+    L +LSEQ L+SCDT + GC GGL+
Sbjct:   41 FAAFKKKYGKVYKDAKEEAFRFRAFEENMEQA-----KIQAAANPYATFGVTPFSDMTREEFRARYRNGAS-------------YFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLM 193          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 64/170 (37.65%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++    K+Y S  EKLHR +IF+ NL+ I   N+ L  TS+ +  +N+FSD+S +E  +KY TGL                      L +  +  P   DWR+   VT VKNQ  CG CWAF+ + ++E    I    L  LSEQ+L+ CD  + GC+GGLL
Sbjct:   23 KAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEII--NKNLNDTSAQY-EINKFSDLSKDETISKY-TGLS--------LPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLL 180          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 62/180 (34.44%), Postives = 97/180 (53.89%), Query Frame = 1
Query:  313 EELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT--NNFGCEGGLL 843
            + ++  D ++E + ++ L+H K+Y+   E+  RL+IF +N   I   N+   +   S+ L +N+++D+ H EF+ + + G                       +      LP+SVDWR KGAVT VK+Q  CG CWAFS+  A+EG +   +G L +LSEQ L+ C T   N GC GGL+
Sbjct:   47 QAVSFADVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFR-QLMNGFN--YTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLM 223          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.493e-21
Identity = 59/170 (34.71%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            +L+  W   + K Y   +++ HR  I++ N+KHI   N    +   +Y LGLN+F+DM+ EEFK KYLT +                         N   +P  +DWR+ G VT VK+Q  CG CWAFS    +EG          + SEQ+L+ C     N GC GGL+
Sbjct:   19 DLWHQWKRMYNKEYNGADDQ-HRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEA----------NNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLM 177          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.252e-21
Identity = 64/175 (36.57%), Postives = 93/175 (53.14%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDAR-NRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD---------TNNFGCEGGLL 843
            F S+  K  KSY + EE  +R  +FK NL  I A+ ++    T+ +  G+ +FSD++  EF+ ++L GLK                           +LP+  DWR+KGAVT VK+Q  CG CWAFS   A+EG + + TG L +LSEQ+L+ CD         + + GC GGL+
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNL--IKAKLHQNRDPTAEH--GITKFSDLTASEFRRQFL-GLKKRLRLPAHAQKAPILP---------TTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLM 208          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.252e-21
Identity = 61/167 (36.53%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            + FES++  + K+Y S  EK  R  IFKDNL  I+A+N       +    +N+FSD+S  E   K+ TGL                      L +  +  P   DWR++  VT +KNQ  CG CWAF+ +A+VE    +    L  LSEQ+L+ CD+ + GC GGLL
Sbjct:   54 DYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKF-TGLS--------IPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLL 211          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.554e-21
Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 1
Query:  358 WMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            W   HG+ Y   EE   R  +++ N+K I+  N+E  Q    + + +N F DM++EEF+ + + G +                         V ++P+SVDWR+KG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+
Sbjct:   32 WKATHGRLYGMNEEGWRRA-VWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFR-QVMNGFQNQKHKKGKVFHESL-----------VLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.554e-21
Identity = 65/187 (34.76%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  298 VGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITS-SYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLLFY 849
            +G +   LT    L   +  W   H + Y   EE   R  +++ N+K I+  N+E +    S+ + +N F DM+ EEF+ + + G +                           + P+SVDWR+KG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+ Y
Sbjct:   12 LGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRA-VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFR-QVMNGFQNRKPRKGKVFQEPLFY-----------EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDY 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:  634 EDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN-NFGCEGGLLFY 849
            + LP+S+DWR+KG +  VK+Q  CG CWAFSAVAA+E IN IVTGNL +LSEQEL+ CD + N GC+GGL+ Y
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDY 88          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ERVC_TABDI1.909e-2165.71Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP_TRYBB1.909e-2135.67Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVCD1.909e-2137.65Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATL_DROME1.909e-2134.44Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATLL_FASHE2.493e-2134.71Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP_PEA4.252e-2136.57Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATV_NPVLD4.252e-2136.53Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATL1_PIG5.554e-2137.58Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_HUMAN5.554e-2134.76Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CYSPL_SOLLC7.253e-2163.01Low-temperature-induced cysteine proteinase (Fragm... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
back to top