CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21
Identity = 64/206 (31.07%), Postives = 104/206 (50.49%), Query Frame = 1
Query:  232 ICIRCSSSRTL--RGHEYDGEFSIVGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGG 837
            I + C++++    + +++DG FS +G     L   ++   LF+ +  ++ K Y S +E   R   FK   K I   N +    SSY LG+N ++D+S++EF     T +KP                      +++  +P +VDWR +  VT VK+Q  CG CW F +  ++EG N +  G L +LSEQ+L+ C   T + GC GG
Sbjct:  186 IPVLCNNAKEAPAKENQFDGLFSSIG--DNLLAKEEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAK---ESSYKLGMNHYADLSNKEFN----TLVKPKVARPSVTGADSVHDD------ESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGG 376          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  343 ELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN--NFGCEGG 837
            EL+  +   H ++Y+S  E+  R  IF+D L+ I   N + +   S+Y+L +N+FSD++ EEF++  +                             V   P+S+DWR KG V  V+NQ  CG CWA S  AA+E  + I +G+   LS Q+L+ C T+  N GC GG
Sbjct:   21 ELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLMKNEASRPNLEGLEVADL-----------TVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGG 177          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21
Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++ K  K Y S  EKL R +IF+ NL+ I  +N+    T+ Y   +N+FSD+S +E  +KY TGL                      L +  +  P   DWR+   VT VKNQ  CG CWAF+ +A++E    I    L  LSEQ+L+ CD  + GC GGLL
Sbjct:   23 KAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQN-DTTAQY--EINKFSDLSKDETISKY-TGLA--------LPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDYVDAGCNGGLL 180          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 61/194 (31.44%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  304 YSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGL-----------KPXXXXXXXXXXXXXXXXXXXXLYKNV-EDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLLFY 849
            Y  E+  +  K    F  +M +H K Y++ +E++ + EIFK N   I   N+ L   + Y   +N+FSD S EE K  + T L           KP                      K++   +P+ +D+R+KG V   K+Q  CG CWAF++V  +E +      N+ + SEQE++ C  +NFGC+GG  FY
Sbjct:  210 YKKEDPINNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNK-LNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKDNFGCDGGHPFY 402          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 63/170 (37.06%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++ K  K+Y S  EKL R +IF+ NL+ I  +N   Q  +S    +N+FSD+S +E  +KY TGL                      L +  +  P   DWR+   VT VKNQ  CG CWAF+ + ++E    I    L  LSEQ+L+ CD  + GC+GGLL
Sbjct:   23 KAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKN---QNDTSAQYEINKFSDLSKDETISKY-TGLS--------LPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDVGCDGGLL 180          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 58/166 (34.94%), Postives = 82/166 (49.40%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT--NNFGCEGGL 840
            F  + ++HGK Y    E   R  IF ++L+ + + NR       Y LG+N F+DMS EEF+   L   +                       ++   LP++ DWR+ G V+ VK+Q  CG CW FS   ++E      TG   +LSEQ+L+ C T  NNFGC GGL
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRR---GLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----------RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGL 213          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 62/171 (36.26%), Postives = 86/171 (50.29%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNV--EDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT---NNFGCEGGLL 843
            ++ W   +GK Y+   E++ R  I++ NLK +   N E  +   SY LG+N   DM+ EE  +   +   P                     YK+   + LP S+DWR+KG VT VK Q  CG CWAFSAV A+E   ++ TG L +LS Q L+ C T    N GC GG +
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVT-------------YKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFM 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 61/165 (36.97%), Postives = 84/165 (50.91%), Query Frame = 1
Query:  358 WMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            W   H + Y   EE   R  +++ N+K I+  NRE  Q    + + +N F DM++EEF+ + + G +                           ++P+SVDWR+KG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+
Sbjct:   32 WKATHRRLYGMNEEGWRRA-VWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFR-QVMNGFQNQKHKKGKMFQEPLFA-----------EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.756e-20
Identity = 63/170 (37.06%), Postives = 88/170 (51.76%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++ ++ K Y+S  EKL R +IF+ NL  I  +NR    T+ Y   +N+FSD+S +E   KY TGL                      L +     P   DWR+   +T VKNQ  CG CWAF+ +A++E    I    L  LSEQ+++ CD+ + GCEGGLL
Sbjct:   23 KAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRN--DTAVY--KINKFSDLSKDETIAKY-TGLS--------LPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCDSVDVGCEGGLL 179          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 1
Query:  640 LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGG 837
            LP  VDWR KGAV  +KNQ  CG CWAFSAVAAVE IN+I TG L +LSEQEL+ CDT + GC GG
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGG 66          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CFAD_DICDI7.253e-2131.07Counting factor associated protein D OS=Dictyostel... [more]
CATLL_PHACE7.253e-2133.93Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATV_NPVHC9.473e-2137.65Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CYSP_PLAFA1.616e-2031.44Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CATV_NPVAP1.616e-2037.06Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
ORYC_ORYSJ2.110e-2034.94Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATS_BOVIN2.110e-2036.26Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CANFA2.110e-2036.97Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATV_NPVEP2.756e-2037.06Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
ERVB_TABDI3.600e-2068.18Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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