CK935239

Overview
NameCK935239
Unique NameCK935239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = 1
Query:  334 KLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTNNFGCEGGLL 843
            K    FE ++ K  KSY S  EKL R +IF+ NL+ I  +N     T+ Y   +N+F+D+S +E  +KY TGL                      L +  +  P   DWR+   VT VKNQ  CG CWAF+ + ++E    I       LSEQ+L+ CD  + GC+GGLL
Sbjct:   23 KAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHN-DSTAQY--EINKFADLSKDETISKY-TGLS--------LPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDAGCDGGLL 180          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  358 WMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT---NNFGCEGGLL 843
            W   +GK Y+   E+  R  I++ NLK +   N E  +   SY LG+N   DM+ EE  +   +   P                     YK+  +  LP SVDWR+KG VT VK Q  CG CWAFSAV A+E   ++ TG L +LS Q L+ C T    N GC GG +
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNIT-------------YKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFM 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 63/167 (37.72%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVE-DLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN--NFGCEGG 837
            ++ W  K+ KSY   EE+L R  ++++NLK I   N+E  +  + + + +N F+D + EEF+      L P                      K V   LP   DWRK+G VT V+NQ  CG CWAF+AV A+EG     TGNLT LS Q LL C  +  N GC  G
Sbjct:   29 WQDWKTKYAKSYSPVEEELKRA-VWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQ-------------KQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWG 181          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            +  W   H + Y   EE+  R  +++ N K ID  N+E  +    + + +N F DM++EEF+ + + G +                         + D+P+SVDW KKG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+
Sbjct:   29 WHQWKATHRRLYGMNEEEWRRA-VWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFR-QVMNGFQNQKHKKGKLFHEPL-----------LVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            +  W   H + Y   EE+  R  +++ N K ID  N+E  +    + + +N F DM++EEF+ + + G +                         + D+P+SVDW KKG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GGL+
Sbjct:   29 WHQWKATHRRLYGMNEEEWRRA-VWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFR-QVMNGFQNQKHKKGKLFHEPL-----------LVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 64/186 (34.41%), Postives = 95/186 (51.08%), Query Frame = 1
Query:  292 SIVGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN--NFGCEGGLL 843
            SI   S   + S  +  + F  WM  + K+Y + +E + R E FK N+ ++   N +    S   LGLN+ +D+S+EE++  YL                         L +     P +VDWR+K AVT VK+Q  CG C++FS   +VEG+  I TG L +LSEQ +L C ++  N GC GGL+
Sbjct:   15 SISFISAGNVFSHKQYQDSFIDWMRSNNKAY-THKEFMPRYEEFKKNMDYVHNWNSK---GSKTVLGLNQHADLSNEEYRLNYL------GTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLM 190          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  358 WMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNREL-QITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCD--TNNFGCEGGLL 843
            W   H + Y + EE   R  +++ N+K I+  N E  Q    + + +N F DM++EEF+                             L+    DLP+SVDWRKKG VT VKNQ  CG CWAFSA  A+EG     TG L +LSEQ L+ C     N GC GG +
Sbjct:   32 WKATHRRLYGANEEGWRRA-VWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMM---------GCFRNQKFRKGKVFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  349 FESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG---NLTALSEQELLSCDTN--NFGCEGGLL 843
            F +WM  H ++Y S+EE   R +IFK N+ ++   N +   T    LGLN F+D++++E++  YL                           K       +VDWR +GAVT +KNQ  CGGCW+FS   + EG + I +G   +L +LSEQ L+ C  +  N GCEGGL+
Sbjct:   30 FTNWMQAHQRTY-SSEEFNARYQIFKSNMDYVHQWNSKGGETV---LGLNVFADITNQEYRTTYL------------GTPFDGSALIGTEEEKIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLM 183          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 63/191 (32.98%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  283 GEFSIVGYSPEELTSTDKLVELFESWMLKHGKSYESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDT---NNFGCEGGLL 843
            G   +  Y+  ++     L   +  W   + K Y+   E++ R  I++ NLK +   N E  +   SY LG+N   DM+ EE  +   +   P                       + + LP SVDWR+KG VT VK Q  CG CWAFSAV A+E   ++ TG L +LS Q L+ C T    N GC GG +
Sbjct:    6 GLLPLCSYAVAQVHKDPTLDHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRS-----------NSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFM 185          
BLAST of CK935239 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 62/169 (36.69%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  367 KHGKSYESTEEKLHRLEIFKDNLKHIDARNR-ELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPXXXXXXXXXXXXXXXXXXXXLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGNLTALSEQELLSCDTN----------NFGCEGGL 840
            K  K Y S EE L R EIFK NL  I+  N   +   +    G+N+F+D+S +EFKN YL   +                         +  +P + DWR +GAVT VKNQ  CG CW+FS    VEG + I    L +LSEQ L+ CD            + GC GGL
Sbjct:   35 KFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEF--------INSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGL 194          
The following BLAST results are available for this feature:
BLAST of CK935239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATV_NPVCF3.600e-2036.47Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATS_HUMAN3.600e-2037.50Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATJ_RAT3.600e-2037.72Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATL2_BOVIN4.701e-2036.31Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN4.701e-2036.31Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CYSP3_DICDI8.019e-2034.41Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATL2_HUMAN8.019e-2037.58Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CYSP4_DICDI1.047e-1935.88Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATS_CANFA1.047e-1932.98Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CYSP1_DICDI1.368e-1936.69Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935239 ID=CK935239; Name=CK935239; organism=Citrus sinensis; type=EST; length=850bp
GGGGAGGGAAAGAGTAATAATAAATACTAGAGGCAAGCAGCAGGAAGTTC
CGGCATATCATCACCTACTTTTATATTTTACGTATATAAATAACCCGATC
ATCAAGCGCGCATAGGTAAATTAACTTGAAGATCAAGGGGGGAGAGAGAG
AGAGAGAGAGAGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCG
TCTTTCTTTGTGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTA
GCAGTAGAACTCTTCGAGGTCATGAATATGATGGTGAGTTCTCCATTGTG
GGATATTCACCGGAGGAGTTGACATCCACGGACAAGCTGGTTGAGCTATT
CGAGTCATGGATGTTGAAACATGGGAAATCGTATGAAAGCACGGAAGAGA
AGTTGCATAGATTGGAGATATTCAAAGACAACTTGAAGCACATTGATGCG
AGGAACAGAGAGCTGCAAATTACTAGTAGCTATTGGCTTGGTCTGAATGA
GTTTTCAGATATGAGCCACGAAGAGTTCAAGAACAAGTACTTAACAGGAC
TCAAACCCGATGATGATGAGTTCCGCAGAAGGAGTCACCGCGACTCTAGT
AGCAGTAGTGATCATTTTTTGTATAAAAATGTAGAGGATTTGCCTCAATC
CGTTGACTGGAGGAAGAAAGGAGCTGTTACTCATGTGAAGAACCAAAATC
CTTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATA
AATCAGATAGTGACGGGAAATCTAACGGCGTTGTCGGAGCAAGAGTTGCT
TAGCTGCGACACAAATAACTTTGGGTGTGAAGGAGGTCTTTTGTTTTATG
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