CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_DEIGD (5'-nucleotidase surE OS=Deinococcus geothermalis (strain DSM 11300) GN=surE PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28
Identity = 81/198 (40.91%), Postives = 108/198 (54.55%), Query Frame = 1
Query:  109 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISAR---PADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 693
            S  +P I+V NDDGI +PG+++L   L       V V APD E+SAV H IT R P+  +    A F  + AY V GTPADC  LGV        PDLV+SGIN+GSN G  + +SGTVA A E    G+PS++ S    GG      +T  A     +  A+LA    +  P R  LN++ P  +P  +G ++TK G
Sbjct:    6 SPDRPRILVANDDGIFSPGIKALALALADVG--DVVVVAPDVEQSAVGHGITIRRPLRFKHTASAGFGTLPAYRVDGTPADCVVLGVHLL---GRPDLVVSGINLGSNLGDDLTHSGTVAAAIEGLALGLPSIAFSQQGNGG--GEYSFTAGAAYAARLARAVLA----KGLPPRVLLNVNFPAGLP--RGVRITKVG 190          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_DESVV (5'-nucleotidase surE OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=surE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 747
            I +TNDDGI APGLR++ + L+    +TV V AP +E+SAV H++T   P+  +    +G   + V GTP DC  LG+S +L    P+LV+SGIN G+N G  ++YSGTV+ A EA   G  +V++SYD      +++ +   A A LP        I     PERC +NI+ P   + + KG ++  Q  +++   W    ++ +GG
Sbjct:    3 IALTNDDGIQAPGLRAIYKALIEAG-HTVDVVAPVTEQSAVGHAVTIAMPLRVKVFHENGFRGHGVYGTPTDCMKLGLS-SLLEHKPELVVSGINAGANVGPDILYSGTVSAATEAAHMGYRAVALSYDSF-RPEDISAHARHAAALLP-------HIEWAGLPERCVVNINYPAVPVESIKGVRVCPQTRAVWH-DWYEHRTDPRGG 199          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_DESVH (5'-nucleotidase surE OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=surE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 747
            I +TNDDGI APGLR++ + L+    +TV V AP +E+SAV H++T   P+  +    +G   + V GTP DC  LG+S +L    P+LV+SGIN G+N G  ++YSGTV+ A EA   G  +V++SYD      +++ +   A A LP        I     PERC +NI+ P   + + KG ++  Q  +++   W    ++ +GG
Sbjct:    3 IALTNDDGIQAPGLRAIYKALIEAG-HTVDVVAPVTEQSAVGHAVTIAMPLRVKVFHENGFRGHGVYGTPTDCMKLGLS-SLLEHKPELVVSGINAGANVGPDILYSGTVSAATEAAHMGYRAVALSYDSF-RPEDISAHARHAAALLP-------HIEWAGLPERCVVNINYPAVPVESIKGVRVCPQTRAVWH-DWYEHRTDPRGG 199          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_SULSY (5'-nucleotidase surE OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=surE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 81/199 (40.70%), Postives = 111/199 (55.78%), Query Frame = 1
Query:  118 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQGTSIFK 708
            K  + +TNDDG  + GL+++   L+  N + V   APD   S  SHS+T+  P+     + D    Y V GTPADC  LG++  L    PDL+ISGIN G N G  V YSGTV  ARE     +PSV+ S   VG   N N +   ++  + I+ A+L  I+N   P+  FLN+++PT IP    KG+ LTKQG   +K
Sbjct:    2 KKIVFLTNDDGYQSKGLQAIRNRLIEEN-FRVITVAPDRNMSGTSHSLTFTRPLKIEKIEEDFY--YIVDGTPADCVHLGLNVILQNQKPDLLISGINTGPNIGNDVFYSGTVGAAREGTLFCIPSVAFS---VGSSKNPN-FEDVSKVAVKIVKALL--IKN--LPKGTFLNVNIPT-IPAEKIKGFLLTKQGRGAYK 188          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_DESVM (5'-nucleotidase surE OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=surE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 747
            + +TNDDGI APGLR++ + L+    + V V AP +E+SAV H++T   P+  +    +G     V GTP DC  LG+S  L    PD+V+SGIN G+N G  ++YSGTV+ A EA   G P++++SYD      +     L+ +A       +LA +  Q  P RC +N++ P   +P  KG +   Q  +++K  W    ++ +GG
Sbjct:    3 VALTNDDGIQAPGLRAMYKALLDAG-HEVHVVAPVTEQSAVGHAVTISLPLRVKEFHENGFRGRGVYGTPTDCVKLGLS-CLLDKKPDVVVSGINAGANVGPDILYSGTVSAATEAAHMGYPALAVSYD------SFRPADLSGQAAHAA--GLLATLDWQALPARCVVNLNYPAVPMPEVKGVRACPQTRAVWK-DWYDHRTDPRGG 199          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_DESOH (5'-nucleotidase surE OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=surE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.184e-27
Identity = 78/183 (42.62%), Postives = 105/183 (57.38%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLA-AEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK 669
            I++TNDDGIDA GL +L RV    +R  V V AP++E+SAV H I+   P+     +   G   YAVSGTPADC  LG+   L P  PDLVISGIN G N G ++ YSGTVA AREA  +GVPS+++S D          Y  A  +    +   ++  +     P   FLN+++P D+P  +
Sbjct:    3 IVLTNDDGIDAEGLLALYRVFSRDHR--VVVVAPEAERSAVGHGISLHQPLRVNQRNHPAGGEWYAVSGTPADCVKLGILALLDPR-PDLVISGINAGLNHGAYMHYSGTVAAAREACVYGVPSIAVSMD---------GYPPAYFDEGASLTQTLVERLAEMEMPANTFLNVNMP-DLPRER 172          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PELCD (5'-nucleotidase surE OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=surE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27
Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISA---RPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 693
            I+VTNDDG+ APG+ +L   L    +  V V APD ++SA+ H++T   P+ A   RP  F      AV GTP DC +LG+   L  SVPDLV++GIN G+N G  + YSGTV  A EA   GVP++++S +  G     ++Y  AA+A L     +  ++  +  P   FLN+++P      +G +LT+QG
Sbjct:    3 ILVTNDDGVHAPGIAALADSLHGLGQ--VVVVAPDRDRSAIGHALTLHAPLRADELRPGVF------AVDGTPTDCVNLGI-HGLLSSVPDLVVAGINRGANLGDDITYSGTVCAAMEATLMGVPALAVSLE--GDTFASSEYRQAADAAL----FLAQKVSEEGLPSDTFLNVNVPAG--RIRGIRLTRQG 177          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_THEEB (5'-nucleotidase surE OS=Thermosynechococcus elongatus (strain BP-1) GN=surE PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.725e-27
Identity = 74/194 (38.14%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPAD---FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 693
            +++ NDDG+ APG+R+L   L       V VC PD E+SA  HS+T   PI A          + A+A SGTP+DC  L +  AL    PD V+SGIN GSN G  ++YSGTV+ A E    G+PS++IS         V+D+  AA+      N +L  + N   P +  LN+++P  +P ++  G  +T+QG
Sbjct:    3 LLIANDDGVFAPGIRTLADTLAIAGHEVVVVC-PDRERSATGHSLTVFDPIRAEVVSDRFHPRIKAWACSGTPSDCVKLALG-ALLEQPPDFVVSGINQGSNLGTDILYSGTVSAAMEGVIEGIPSIAISL----ASFTVHDFQPAAD----FTNRLLKALENAPLPPKVLLNVNVPA-LPASEIAGVVITRQG 185          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BREBN (5'-nucleotidase surE OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=surE PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.865e-27
Identity = 74/178 (41.57%), Postives = 96/178 (53.93%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDG--VTAYAVSGTPADCASLGVSQALFP--SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP 648
            I+VTNDDGIDA G++ LV  L++     V + AP  EKS V H IT+R  +S    DF G  V A+AV+G PADC        LF     PD+V SGIN+G+N G  + YSGT +GAREA   GVP V++SYD    + N  D     E   P++                F NI++P
Sbjct:    3 ILVTNDDGIDALGIKRLVEALLTLEGAEVSIVAPVEEKSGVGHGITYRSALSPEQRDFYGMPVKAWAVNGNPADCVK-AAYHLLFEHGKKPDIVFSGINVGTNLGRDIYYSGTCSGAREAVILGVPGVALSYDNWFDQDNYGD---VVEMIRPLVKEFSDRAIKGELASEVFWNINIP 176          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_GEOSF (5'-nucleotidase surE OS=Geobacter sp. (strain FRC-32) GN=surE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK 669
            I++TNDDG+ APGL +L   +    +  V V APD E+SAV H++T  HP+ A      G   +AV GTP DC +LG+  +L    PD+V+SGIN G+N G  V YSGTV+ A EA   G+P++++S   +   +   +Y  AA+  +     + A +R +  P   FLN+++P D+P  +
Sbjct:    3 ILLTNDDGVRAPGLNALAEAMTVLGQ--VFVIAPDREQSAVGHALTLHHPLRANKI---GENIFAVDGTPTDCVNLGI-HSLLSFKPDIVVSGINRGANLGDDVTYSGTVSAAMEATLMGIPAIAVS---LVTSAEGTNYAAAAQFAV----KLAATVREKGLPADTFLNVNVP-DLPRER 169          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_DEIGD3.369e-2840.915'-nucleotidase surE OS=Deinococcus geothermalis (... [more]
SURE_DESVV9.803e-2837.025'-nucleotidase surE OS=Desulfovibrio vulgaris sub... [more]
SURE_DESVH9.803e-2837.025'-nucleotidase surE OS=Desulfovibrio vulgaris (st... [more]
SURE_SULSY1.280e-2740.705'-nucleotidase surE OS=Sulfurihydrogenibium sp. (... [more]
SURE_DESVM1.280e-2736.065'-nucleotidase surE OS=Desulfovibrio vulgaris (st... [more]
SURE_DESOH2.184e-2742.625'-nucleotidase surE OS=Desulfococcus oleovorans (... [more]
SURE_PELCD2.852e-2739.585'-nucleotidase surE OS=Pelobacter carbinolicus (s... [more]
SURE_THEEB3.725e-2738.145'-nucleotidase surE OS=Thermosynechococcus elonga... [more]
SURE_BREBN4.865e-2741.575'-nucleotidase surE OS=Brevibacillus brevis (stra... [more]
SURE_GEOSF6.354e-2738.675'-nucleotidase surE OS=Geobacter sp. (strain FRC-... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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