CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_METCA (5'-nucleotidase surE OS=Methylococcus capsulatus GN=surE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.587e-24
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGLR+L   L    + TV   AP+  +S  S+S+T   P+ A  A+   +    V GTP DC  L ++  L  S PD+V +GIN G+N G  V+YSGTVA A E  F G+P+V+IS        N   +  AA+  +     +L  IR    P    LN+++P DIP +  +GY+ T+ G
Sbjct:    3 ILLSNDDGYAAPGLRALAAALSPLAKITV--VAPERNRSGASNSLTLERPLRATRAENGFIR---VDGTPTDCVHLAIT-GLLDSEPDMVFAGINHGANLGDDVIYSGTVAAATEGRFLGLPAVAISL----AAHNPEHFETAAQVAI----ELLERIRENPLPADTILNVNVP-DIPPDELRGYRATRLG 178          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_SALRD (5'-nucleotidase surE OS=Salinibacter ruber (strain DSM 13855) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 76/213 (35.68%), Postives = 117/213 (54.93%), Query Frame = 1
Query:  109 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD----GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY-DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQGTSIFKMGWRRVT 729
            S  +P I++ NDDGI APG++SL   L       + V AP +E+SAV H+IT R P+ A   +F+     + A+ V+GTPAD   L   + L  + PDLV+SGIN G N   +V+YSGTV+ A EA   G+ S++IS  +W     +   + +A +    I+   L    ++  P+   LN+++P       +G  LT+Q  S ++ G+ R T
Sbjct:    6 SGDEPRILLCNDDGIHAPGIQSLASALDGLGE--LFVVAPTTEQSAVGHAITVRDPVRAHREEFEVPSGPIPAWGVTGTPADSVKLACHE-LLDAPPDLVVSGINQGPNTAVNVLYSGTVSAATEASILGLDSLAISLCEW-----SKPQFEVAGQWARRIVEWAL----DRGLPQGVLLNVNVPALSAEQIEGVALTRQARSRWEEGFERRT 206          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PROMT (5'-nucleotidase surE OS=Prochlorococcus marinus (strain NATL2A) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 65/180 (36.11%), Postives = 96/180 (53.33%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF---DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSI---SYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP 648
            I+++NDDG+ A G+R+L     S       VC PD E+SA  H +T   PI A  AD     G+ A+  SGTPADC  L +++ L    PDL++SGIN G N G  +  SGTVA A E    G+PS+++   S+ W        +++ A +  L I    +     Q +P+   LN+++P
Sbjct:    6 ILISNDDGVFAEGIRTLATSAASRGHKVTVVC-PDQERSATGHGLTLHSPIRAEKADELFGGGIKAWGCSGTPADCVKLALNE-LLDQKPDLILSGINHGPNLGTDIFCSGTVAAALEGTLDGIPSIAVSVASFQW-------KNFSFAGKLSLDIAEKAI----QQNWPKNLLLNLNIP 172          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_LEGPC (5'-nucleotidase surE OS=Legionella pneumophila (strain Corby) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQGT 696
            I+V+NDDG+ APG++ L   L +     V+V APD  +S  S+S+T   P+  +  D +G   Y+V GTP DC  L ++  L P + D+V+SGIN G+N G  V+YSGTVA A E  + G+P+++IS   VG   N+  Y  AA     I   ++ ++     P +  LN+++P D+P N  +G ++T+ GT
Sbjct:    3 ILVSNDDGVLAPGIKILANELSTLGE--VKVVAPDRNRSGASNSLTLTQPLRVKQLD-NGY--YSVDGTPTDCVHLALTGFLEP-IADIVVSGINEGANLGDDVLYSGTVAAAMEGRYLGLPAIAIS--MVG--DNIQHYETAA----IIAKQLVIKLSANKLPSQTILNVNVP-DLPLNQIRGMQVTRLGT 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_GEMAT (5'-nucleotidase surE OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 86/232 (37.07%), Postives = 122/232 (52.59%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPI-INAILAEIRNQT----YPERCFLNIDLPTDIPNN--KGYKLTKQGTSIF-------KMGWRRVTSEMQGGKMLSTMTMDTD 780
            I+++NDDGI A GL  L R   S     + V APD E+SA SHS+T  HP+  RP    G   + V GTP DC  L   +AL  + PD V+SGIN G N G  V+YSGTVA A E    G+P++++S+       NV    L A+A L   + AI + + + T    +P    LN++LP  +P +  +G +LT+ G  +F       K  W R    + GG +  +   D+D
Sbjct:    3 ILLSNDDGILAKGLGVLERAAESLGE--LHVVAPDREQSATSHSLTLHHPL--RPVRL-GERRWQVDGTPTDCVMLAC-EALLEARPDFVLSGINHGPNMGEDVLYSGTVAAAMEGLALGIPAIALSF-----AGNV----LRADALLDTQVGAIRSLLHHLTGLPAFPADTLLNVNLPA-VPGDEIRGIRLTRLGRRVFSDSIARMKDPWGRDILWIGGGSVEWSGAPDSD 218          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_CLOTE (5'-nucleotidase surE OS=Clostridium tetani GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 67/213 (31.46%), Postives = 113/213 (53.05%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGV--TAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKML 756
            +++TNDDG+++ G+ +L + L     + + + AP  E SA SHSIT   P+  +  + D +  T Y++SGTPADC  + + + L   V D+VISGIN G+N G  ++YSGTV+ A EA  H +PS+++S +   G  N        +    I   ++   +  +      LN+++P  D  + KG K+ + G   F   + ++    +   ML
Sbjct:    3 LLLTNDDGVNSKGIYTLAKEL--QKEHEIIIAAPSIEMSAKSHSITIAKPLFIKEVELDDINATTYSISGTPADCVKVAMDKILDKPV-DMVISGINYGTNLGIDILYSGTVSAAIEAAIHNIPSIAMSAEVKNGDINF-------DTAASIARELVKISQENSMKGNLVLNVNVPCLDKDSLKGLKVCQMGGRTFTSYFEKIEKNKEVSYML 205          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_ALKMQ (5'-nucleotidase surE OS=Alkaliphilus metalliredigens (strain QYMF) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF--DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAE-ACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 693
            I+VTNDDGI A G+  L + L       V V AP++E+SAV H IT  HP+      F    + AY+V+GTPADC  + +   L    P +V+SGIN G N G  V+YSGTV+ A EA    +PS+++S       S ++ Y  AAE  C  + N +  E  + T      +N++ PT   +  KG K+T  G
Sbjct:    3 ILVTNDDGIFAEGIYVLAKSLQDVGE--VIVVAPNTERSAVGHGITMHHPLRMAGVRFFDTSIEAYSVNGTPADCIKIAIEVLLKDRKPTVVVSGINNGPNLGTDVLYSGTVSAAVEAAILDLPSIAVSM----ATSKIDQYNHAAEFICKLLSNTLHIEELSDT-----IINVNYPTIAYSEIKGVKVTNLG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_SYNP6 (5'-nucleotidase surE OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPAD--FD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 693
            ++++NDDG+ A G+++L   LV        VC PD E+SA  H +T   PI A   +  FD  V  +A SGTP+DC  L +   L P +PD V+SGIN G N G  V+YSGTV+ A E    G+PS+++S           D+  AAE    I   +L  + + + P +  L++++P  +P  +  G +LT+QG
Sbjct:    3 LLISNDDGVFALGIQTLANRLVQAGHEVTVVC-PDRERSATGHGLTLHKPIRAERIEGLFDPAVQVWACSGTPSDCVKLALG-TLLPELPDFVLSGINHGPNLGTDVLYSGTVSAAMEGVIEGIPSIALSL----ASFTARDFEPAAE----IAVELLERLPHPSSP-KVLLSVNIP-PVPKEEIAGIRLTRQG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_SYNE7 (5'-nucleotidase surE OS=Synechococcus elongatus (strain PCC 7942) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPAD--FD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 693
            ++++NDDG+ A G+++L   LV        VC PD E+SA  H +T   PI A   +  FD  V  +A SGTP+DC  L +   L P +PD V+SGIN G N G  V+YSGTV+ A E    G+PS+++S           D+  AAE    I   +L  + + + P +  L++++P  +P  +  G +LT+QG
Sbjct:    3 LLISNDDGVFALGIQTLANRLVQAGHEVTVVC-PDRERSATGHGLTLHKPIRAERIEGLFDPAVQVWACSGTPSDCVKLALG-TLLPELPDFVLSGINHGPNLGTDVLYSGTVSAAMEGVIEGIPSIALSL----ASFTARDFEPAAE----IAVELLERLPHPSSP-KVLLSVNIP-PVPKEEIAGIRLTRQG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PARDP (5'-nucleotidase surE OS=Paracoccus denitrificans (strain Pd 1222) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 73/195 (37.44%), Postives = 110/195 (56.41%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVL--VSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNV-NDYTLAAEACLPIINAILAEIRNQTYPE--RCFLNIDL-PTDIPNNKGYKLTKQG 693
            I++TNDDGI+APGL +L  +   V+     V   AP  E+S V+H I++ HP         G   +A  GTPADC    ++  +  + PDLV+SG+N G+N G +V+YSGTV GA EA   G+P++++S  ++G ++ V +D   AA    P +   L +  + T  E  R F NI+  P D  + KG ++  QG
Sbjct:    3 ILITNDDGINAPGLETLEAIATEVAGPAGEVWTVAPAFEQSGVAHCISYVHPTLIAEL---GPRRFAAEGTPADCVLAAIADVMRDNPPDLVLSGVNRGNNSGENVMYSGTVGGAMEAALQGLPAIALS-QYMGSRTAVLDDPFQAARMHGPRLIRQLLDYGDWTSDEDFRLFYNINFPPCDAGSVKGTRVAPQG 193          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_METCA8.587e-2438.225'-nucleotidase surE OS=Methylococcus capsulatus G... [more]
SURE_SALRD1.122e-2335.685'-nucleotidase surE OS=Salinibacter ruber (strain... [more]
SURE_PROMT1.122e-2336.115'-nucleotidase surE OS=Prochlorococcus marinus (s... [more]
SURE_LEGPC1.122e-2338.025'-nucleotidase surE OS=Legionella pneumophila (st... [more]
SURE_GEMAT1.122e-2337.075'-nucleotidase surE OS=Gemmatimonas aurantiaca (s... [more]
SURE_CLOTE1.122e-2331.465'-nucleotidase surE OS=Clostridium tetani GN=surE... [more]
SURE_ALKMQ1.122e-2338.345'-nucleotidase surE OS=Alkaliphilus metalliredige... [more]
SURE_SYNP61.465e-2336.605'-nucleotidase surE OS=Synechococcus sp. (strain ... [more]
SURE_SYNE71.465e-2336.605'-nucleotidase surE OS=Synechococcus elongatus (s... [more]
SURE_PARDP1.465e-2337.445'-nucleotidase surE OS=Paracoccus denitrificans (... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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