CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_CAMLR (5'-nucleotidase surE OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=surE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVS-GTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYP--ERCFLNIDLPTDIPNNKGYKLTKQGTSIF 705
            I++TNDDG ++ GL  L ++L    +  + + AP +EKSA SHSIT   P+  +         Y +  GTPADC  L +       +PDL+ISGIN G+N G  + YSGT AGA EA  HG+P++++S  +   +  +N + LA    L I   I+ ++  + +P  ++ FLNI+ P+   N KG K+ K G  I+
Sbjct:    4 ILLTNDDGYESKGLIKLAKMLKKHFKAEITIVAPANEKSACSHSITLTKPLRFQKVK---KRFYKLEDGTPADCVYLALHALYKNHLPDLIISGINKGANVGEDITYSGTCAGAMEAVLHGIPAIALSQFYQDDQKELN-FKLA----LNITKKIVKKVFKKGFPLDKKEFLNINFPSSKTNFKGIKICKAGKRIY 191          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_THEPX (5'-nucleotidase surE OS=Thermoanaerobacter sp. (strain X514) GN=surE PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 66/194 (34.02%), Postives = 111/194 (57.22%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPA-DFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIF 705
            I++TNDDG+   G+  L   L   ++Y V V AP+ E+SA+SH+IT   P+  +   + D +  YA++GTP+DC  LG+ + +    PD+VISGIN G N G  ++YSGTV+ A EA  +G+P++++S       +++ D  +        +  ++ ++  +  P+   LN+++P      KG K T  G SI+
Sbjct:    3 ILLTNDDGVQGLGMLKLAEYL--KDKYKVTVVAPEKERSAISHAITLHKPLRLKKVKEEDSLKIYAINGTPSDCVKLGI-EVVLREKPDIVISGINEGLNLGTDILYSGTVSAAIEAAIYGIPAIAVSR---AETADIEDRRI-----YKFLENLIEKVLEKGLPKNTLLNVNIPDFKKGIKGVKATILGKSIY 185          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_THEP3 (5'-nucleotidase surE OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=surE PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 66/194 (34.02%), Postives = 111/194 (57.22%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPA-DFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIF 705
            I++TNDDG+   G+  L   L   ++Y V V AP+ E+SA+SH+IT   P+  +   + D +  YA++GTP+DC  LG+ + +    PD+VISGIN G N G  ++YSGTV+ A EA  +G+P++++S       +++ D  +        +  ++ ++  +  P+   LN+++P      KG K T  G SI+
Sbjct:    3 ILLTNDDGVQGLGMLKLAEYL--KDKYKVTVVAPEKERSAISHAITLHKPLRLKKVKEEDSLKIYAINGTPSDCVKLGI-EVVLREKPDIVISGINEGLNLGTDILYSGTVSAAIEAAIYGIPAIAVSR---AETADIEDRRI-----YKFLENLIEKVLEKGLPKNTLLNVNIPDFKKGIKGVKATILGKSIY 185          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_CLOB6 (5'-nucleotidase surE OS=Clostridium botulinum (strain 657 / Type Ba4) GN=surE PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 76/212 (35.85%), Postives = 121/212 (57.08%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKML 756
            I++TNDDGI+A G+ +L  +L  +  + V + AP++++SA SHSIT   PI  +       V AY++SGTPADC  + + + L P   D+VISGIN G N G  ++YSGTV+ A E   + VPS+++S  ++  K+   +Y +AA+  L ++N     ++ +       LN+++P       KG K+ K G  IF   +     E +G K+L
Sbjct:    3 ILLTNDDGIEAEGINTLAELL--SKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNVEAYSISGTPADCVRVALDK-LVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGSMYKVPSMAVSAQFI--KNKKENYKIAAKYALDMLN----RLKKEDLKNDVVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDE-EGNKIL 204          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_SYNAS (5'-nucleotidase surE OS=Syntrophus aciditrophicus (strain SB) GN=surE PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.379e-26
Identity = 77/190 (40.53%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  130 MVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDG-VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQG 693
            ++TNDDGI A GL +L   L  +      + AP+ E+SAV H+IT   P+  R    DG    YAVSGTPADC  +G+ + L     DLV+SGIN+G+N G +V+YSGTV+ A E    GVPS++IS     G     DYT AA     +   I+     ++      LNI++P   + + KGY +T+QG
Sbjct:    4 LLTNDDGIYARGLSALYSEL--SKDADCLIVAPEVERSAVGHAITLNRPLMVRRTKKDGNFLGYAVSGTPADCVKIGIKE-LSEKPVDLVVSGINIGANVGINVIYSGTVSAATEGAILGVPSMAISL----GTLRNADYTFAAHFARTMARFIMKYFEKKSVA----LNINVPALPVQDIKGYAVTRQG 182          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_THETN (5'-nucleotidase surE OS=Thermoanaerobacter tengcongensis GN=surE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 62/197 (31.47%), Postives = 110/197 (55.84%), Query Frame = 1
Query:  118 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPA-DFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIF 705
            K ++++TNDDG+ A G+  L   L   N + V V AP+ E+SA+SH+IT   P+  +P  + + +  YA++GTP+DC  +G+ + +    PD++ISGIN G N G  ++YSGTV+ A E   +G+P++++S +  G       Y          +  ++ ++  +  P+   LN+++P       G ++T  G  I+
Sbjct:    3 KTSVLLTNDDGVQAKGILYLAEYL-KENGFDVVVVAPEKERSAISHAITLHKPLRLKPVREEENLRIYAINGTPSDCVKMGI-EVVMEKNPDIIISGINNGLNMGTDILYSGTVSAAIEGALYGIPALAVSLEEDGDFEEQRMYI--------FLKKLIEKVLEEGLPKNTLLNVNIPDFRKGINGIRITILGKRIY 189          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PELPD (5'-nucleotidase surE OS=Pelobacter propionicus (strain DSM 2379) GN=surE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 77/195 (39.49%), Postives = 110/195 (56.41%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQGTSIF 705
            IMVTNDDGI APG+++L   L      TV   APD E+SAV H++T   P+       DG   YAV GTP DC ++G+  +L P  PDL++SGIN G+N G  V YSGTVA A EA   G+P++++S   +  +     +  AA+  + +   +L    +   PE  FLN+++P D P    +   +T+QG   F
Sbjct:    3 IMVTNDDGIQAPGIQALASALRVLGEVTV--VAPDRERSAVGHALTLNSPLRVFELR-DGF--YAVDGTPTDCVNMGI-HSLLPFRPDLIVSGINHGANLGDDVTYSGTVAAAIEATLMGIPAIAVS---LATQERSGHFPEAAQIAVRVARQVL----SNGLPEDTFLNVNVP-DCPAEEIRPPLVTRQGKRSF 183          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_CLOBL (5'-nucleotidase surE OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=surE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 75/212 (35.38%), Postives = 121/212 (57.08%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKML 756
            I++TNDDGI+A G+ +L  +L  +  + V + AP++++SA SHSIT   PI  +       + AY++SGTPADC  + + + L P   D+VISGIN G N G  ++YSGTV+ A E   + VPS+++S  ++  K+   +Y +AA+  L ++N     ++ +       LN+++P       KG K+ K G  IF   +     E +G K+L
Sbjct:    3 ILLTNDDGIEAEGINTLAELL--SKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALDK-LVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYKVPSMAVSAQFI--KNKKENYKIAAKYALGMLN----RLKKEDLKNDVVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDE-EGNKVL 204          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_CLOBK (5'-nucleotidase surE OS=Clostridium botulinum (strain Okra / Type B1) GN=surE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.025e-26
Identity = 75/212 (35.38%), Postives = 121/212 (57.08%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKML 756
            I++TNDDGI+A G+ +L  +L  +  + V + AP++++SA SHSIT   PI  +       + AY++SGTPADC  + + + L P   D+VISGIN G N G  ++YSGTV+ A E   + VPS+++S  ++  K+   +Y +AA+  L ++N     ++ +       LN+++P       KG K+ K G  IF   +     E +G K+L
Sbjct:    3 ILLTNDDGIEAEGINTLAELL--SKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALDK-LVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYKVPSMAVSAQFI--KNKKENYKIAAKYALGMLN----RLKKEDLKNDVVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDE-EGNKVL 204          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_HELHP (5'-nucleotidase surE OS=Helicobacter hepaticus GN=surE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.175e-26
Identity = 82/196 (41.84%), Postives = 105/196 (53.57%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSV-PDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVN-DYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIF 705
            I++TNDDG D+ GL +L   L       V V AP SEKSA  H +T   P+S    D D        GTP+DC  L ++     S  PDLVISGIN+GSN G  + YSGT AGA E    GVPS++IS        + + D++LA E    I   I A  +     ER FLNI++P   P   KGYK+T+ G  I+
Sbjct:    4 ILLTNDDGFDSSGLLALKDALKDIAH--VMVVAPASEKSACGHGLTLTRPLSFVQLDDDFYKLE--DGTPSDCVYLALNTLYKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQGVPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFA--KGFPLGERKFLNINIPHIKPKECKGYKITQMGYRIY 193          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_CAMLR3.153e-2637.245'-nucleotidase surE OS=Campylobacter lari (strain... [more]
SURE_THEPX4.118e-2634.025'-nucleotidase surE OS=Thermoanaerobacter sp. (st... [more]
SURE_THEP34.118e-2634.025'-nucleotidase surE OS=Thermoanaerobacter pseudet... [more]
SURE_CLOB64.118e-2635.855'-nucleotidase surE OS=Clostridium botulinum (str... [more]
SURE_SYNAS5.379e-2640.535'-nucleotidase surE OS=Syntrophus aciditrophicus ... [more]
SURE_THETN7.025e-2631.475'-nucleotidase surE OS=Thermoanaerobacter tengcon... [more]
SURE_PELPD7.025e-2639.495'-nucleotidase surE OS=Pelobacter propionicus (st... [more]
SURE_CLOBL7.025e-2635.385'-nucleotidase surE OS=Clostridium botulinum (str... [more]
SURE_CLOBK7.025e-2635.385'-nucleotidase surE OS=Clostridium botulinum (str... [more]
SURE_HELHP9.175e-2641.845'-nucleotidase surE OS=Helicobacter hepaticus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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