CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURP1 (5'-nucleotidase surE OS=Burkholderia pseudomallei (strain 1710b) GN=surE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LNI++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNINIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURP0 (5'-nucleotidase surE OS=Burkholderia pseudomallei (strain 1106a) GN=surE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LNI++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNINIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_MARAV (5'-nucleotidase surE OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 61/193 (31.61%), Postives = 102/193 (52.85%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISAR--PADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 693
            I+++NDDG+ +PGL +L   L       ++V APD + S  S+++T   P++    P  F      +V GTP DC  L V+  LF +  D V+SGIN  +N G  ++YSGTVA A E    G+P++++S         VN+     +    ++  +L   +      R  LN+++P D+P  +  G+++T+ G
Sbjct:    3 ILLSNDDGVHSPGLVALYEGLKGLGE--LKVVAPDRDHSGASNALTLNRPLTVEQHPNGFR-----SVDGTPTDCVHLAVN-GLFDTAFDRVVSGINTHANLGDDIIYSGTVAAATEGRHLGLPAIAVSL--------VNNGHFHYDTAARVVRLLLEYKQALKLGPRSILNVNVP-DLPWERLSGFRVTRLG 178          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURTA (5'-nucleotidase surE OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       V V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    +G+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--VMVMAPEQNCSGASNSLTLSRPLSVSRSATTGF--YYVNGTPTDSVHVALT-GMLDAKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLED---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYGELRGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURP6 (5'-nucleotidase surE OS=Burkholderia pseudomallei (strain 668) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURMS (5'-nucleotidase surE OS=Burkholderia mallei (strain SAVP1) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURMA (5'-nucleotidase surE OS=Burkholderia mallei GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURM9 (5'-nucleotidase surE OS=Burkholderia mallei (strain NCTC 10229) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_BURM7 (5'-nucleotidase surE OS=Burkholderia mallei (strain NCTC 10247) GN=surE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+++NDDG  APGL +L   L       + V AP+   S  S+S+T   P+S   +   G   Y V+GTP D   + ++  +  + PDLV+SGIN G N G   +YSGTVA A E    GVP+++ S    +W    +++ D   AA     I+   L    +   P +  LN+++P ++P    KG+++T+ G
Sbjct:    3 ILLSNDDGYLAPGLAALYEALRPLAE--ILVMAPEQNCSGASNSLTLSRPLSVSRSAATGF--YYVNGTPTDSVHVALT-GMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEW----AHLGD---AARVAAEIVRHYL----DHPLPGQPLLNVNIP-NLPYEELKGWRVTRLG 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_WOLTR (5'-nucleotidase surE OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=surE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17
Identity = 54/190 (28.42%), Postives = 102/190 (53.68%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISAR-PADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 693
            I++TNDDG ++ G++ L++ +       + + APD+++S  + S+   HP+      +      ++VSGTPADC  + +++ +    PDLV+SG+N+GSN G  V YSGT+    E     +PS+++S  + GG +  N    A +        ++A++    +P+   ++I+  +     KG +  +QG
Sbjct:    3 ILITNDDGFESEGIK-LLKEVARNFASEIWIVAPDTDRSGAARSLD--HPVKQSIRINQHNEREFSVSGTPADCVIIALNK-IMDKKPDLVLSGVNIGSNVGDDVCYSGTIGAVMEGAARSIPSIALSQAYHGGINWYNTKIFAPK--------VIAKLVKVGWPKNIAMSINF-SATEKVKGVEFAEQG 179          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_BURP13.495e-1734.025'-nucleotidase surE OS=Burkholderia pseudomallei ... [more]
SURE_BURP03.495e-1734.025'-nucleotidase surE OS=Burkholderia pseudomallei ... [more]
SURE_MARAV4.564e-1731.615'-nucleotidase surE OS=Marinobacter aquaeolei (st... [more]
SURE_BURTA4.564e-1733.515'-nucleotidase surE OS=Burkholderia thailandensis... [more]
SURE_BURP64.564e-1733.515'-nucleotidase surE OS=Burkholderia pseudomallei ... [more]
SURE_BURMS4.564e-1733.515'-nucleotidase surE OS=Burkholderia mallei (strai... [more]
SURE_BURMA4.564e-1733.515'-nucleotidase surE OS=Burkholderia mallei GN=sur... [more]
SURE_BURM94.564e-1733.515'-nucleotidase surE OS=Burkholderia mallei (strai... [more]
SURE_BURM74.564e-1733.515'-nucleotidase surE OS=Burkholderia mallei (strai... [more]
SURE_WOLTR7.785e-1728.425'-nucleotidase surE OS=Wolbachia sp. subsp. Brugi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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