CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PSEMY (5'-nucleotidase surE OS=Pseudomonas mendocina (strain ymp) GN=surE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16
Identity = 59/190 (31.05%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQG 693
            I+++NDDG++APG+ +L + L       V   AP  ++S  S ++T   P+         ++   ++GTP DC  LG++  L    PD+V+SGIN+G+N G  V+YSGTVA A E  F   P+ + S       S + D    A         ++        P R  LN+++P   + + +G +LT+ G
Sbjct:    3 ILISNDDGVNAPGIAALHQALADYAECVV--IAPAEDRSGASSALTLDRPLHPMALSNGYIS---LNGTPTDCVHLGLN-GLLEQTPDMVVSGINLGANLGDDVLYSGTVAAALEGRFLARPAFAFSL-----LSRLPDNLPTAAY---FARKLVEAHERLELPPRTVLNVNVPNLPLEHIRGVQLTRLG 178          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_METST (5'-nucleotidase surE OS=Methanosphaera stadtmanae (strain DSM 3091) GN=surE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16
Identity = 57/184 (30.98%), Postives = 99/184 (53.80%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVT-AYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY----DWVGGKSNVN--DYTLAAEACLPIINAILAEIRNQTYPERC-FLNIDLPTD 654
            I++TNDDG+ + G+ +    +    + T+   AP +++S V H+IT   P+ A   +    T  YAV+GTP DC  L V +++    PDL+ISG+N+G N    +  SGT+    EA   G+P++++S     + +  ++ VN  DY+ A      I+N +  ++     PE    LN+++P +
Sbjct:    3 ILITNDDGLTSNGIIAARNSVEDLGQTTL--VAPLTQQSGVGHAITLMKPLRAIKTELSDKTYGYAVTGTPTDCVILAV-KSIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFGIPAIAVSLQVNREDLKFRTGVNFIDYSHAES----IVNKLAKKVIKHGMPEGVDILNLNIPAN 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_EHRCR (5'-nucleotidase surE OS=Ehrlichia chaffeensis (strain Arkansas) GN=surE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 58/190 (30.53%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYT-VQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 693
            +++TNDDG  A G++ L  ++++    + + V AP S  S    S+  RH I          T + V+ TP+    LG+ + +    PDLV+SGIN G N G  V YSGT+A A EA    +PS++IS ++ G    +N +    +    I++ +L      ++ +   ++++ P  + + KG K T QG
Sbjct:    3 VLLTNDDGFHANGIKVLKEIVMAAGIASEIWVVAPLSNCSGCGRSVGLRHAIEVYKVSD---TEFIVNSTPSTTMFLGLKE-IVGEKPDLVLSGINSGVNIGNDVTYSGTIAAAAEAAMMSIPSIAISQEYDGRSGEIN-WENPRKFLKGIVDMLLGA---PSWDKSTVMSVNFP--LISAKGIKFTSQG 182          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_POLSJ (5'-nucleotidase surE OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=surE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.468e-15
Identity = 61/207 (29.47%), Postives = 101/207 (48.79%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRRVTSEM 738
            I++ NDDG  A G+ +L   L       V+V AP+   SA S+++T   P+  + A  +G     ++GTPADC  + ++  L    PDLV+SGIN G+N G   +YSGTV  A E +  G+PS++ S     W              E  +P +  +    +    P    LN+++P ++P+++      QG  + ++G R     +
Sbjct:    3 ILICNDDGYQASGIIALYEALKIVA--DVEVVAPEQNNSAKSNALTLHSPMYVQTAA-NGFRY--INGTPADCVHIALT-GLLGYRPDLVVSGINNGANMGDDTIYSGTVGAAMEGYLFGIPSIAFSQTEKGWAHIDVAARRARELVEQLMPSLEVVAEGAQPALAP--WLLNVNIP-NLPDDQ-----IQGVKVARLGRRHAAERV 195          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_RHOFD (5'-nucleotidase surE OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=surE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS 507
            I++ NDDG  APGL +L   L       V+V AP+   SA S+++T   P+    A  +G     ++GTPADC  + ++  L    PDLV++GIN G+N G   +YSGTV  A E +  G+P+++ S
Sbjct:    3 ILICNDDGYQAPGLVALYDALKDVAE--VEVVAPEQNNSAKSNALTLHTPMYVCRAS-NGFRY--INGTPADCVHIALT-GLLGYRPDLVLAGINNGANMGDDTIYSGTVGAAMEGYLFGIPAIAFS 123          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_POLNA (5'-nucleotidase surE OS=Polaromonas naphthalenivorans (strain CJ2) GN=surE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15
Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY---DWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I++ NDDG  A G+ +L   L +     V+V AP+   SA S+++T   P+  + A  +G     ++GTPADC  + ++  L    PDLV+SGIN G+N G   +YSGTV  A E +  G+P+++ S     W              +  +P + A+    +    P    LN+++P ++P    +G+K+ + G
Sbjct:    3 ILICNDDGYQASGIVALYEALKTIA--DVEVVAPEQNNSAKSNALTLHSPMYVQTAA-NGFRY--INGTPADCVHIALT-GLLGYRPDLVVSGINNGANMGDDTIYSGTVGAAMEGYLFGIPAIAFSQTEKGWTHIDVAAQQARNLIKQLIPSLEAVAEGAQPSVPP--WLLNVNIP-NLPAGQVEGFKVCRLG 187          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_NATPD (5'-nucleotidase surE OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=surE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.271e-15
Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVV-YSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDY----TLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGY 675
            +++TNDDGIDA G+R+L   L       V   AP  ++SAV         +S      D    YAV GTPADC   G+        PD+V++G N G+N G +V+  SGTV+ A EA F GVP+++ S  +  G   + ++    T  AEA   +   +   I    +    +LN++ P  +P   G+
Sbjct:    3 VLLTNDDGIDAVGIRALYDALAEV--ADVTAVAPADDQSAVGRQ------LSRTVELHDHELGYAVEGTPADCVIAGL--GALDLDPDIVVAGCNEGANLGEYVLGRSGTVSAAVEAAFFGVPAIAASVYFPAGDVTIEEFDPDKTDFAEASRAVRYLVDNAIGAGVFDAADYLNVNAP--LPPETGH 178          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_METS3 (5'-nucleotidase surE OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=surE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 56/202 (27.72%), Postives = 107/202 (52.97%), Query Frame = 1
Query:  130 MVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF-DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGY-HVVYSGTVAGAREAFFHGVPSVSISYD-------WVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERC-FLNIDLPTDIPNNKGYKLTKQGTSIF 705
            +++NDDG++A G+ +    +   +   V V AP++++S + H+IT   P+   P    D   AY V+GTP D  + G+ + +    PD++ISGIN G N G   +  SGT+  A EA   G+PS++IS +       +  G  ++ D++ A +    ++  +      +  P+    LN+++P + P ++ +++ K G  ++
Sbjct:    4 LISNDDGVNATGILAAKNAI--EDLCEVCVVAPETQQSGIGHAITLYDPLRINPTTLRDKSQAYGVTGTPTDAVTFGLFE-IMGEKPDIMISGINTGFNIGKAELTTSGTIGAALEAASFGIPSIAISQEVTRDYIKFENGTVDI-DFSFAGKMLRKLVKIVF----KKGLPDGIDLLNVNIPEN-PVDEEFEVAKLGNRMY 196          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_AZOVD (5'-nucleotidase surE OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=surE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQG 693
            I++ NDDG  APG+ +L   L       V   AP  + S VS S+T   P+  +      +   A+ GTP DC  LG++  L P VPD+V+SGIN+G+N G  V+YSGTVA A E  F   P+ + S       S   D   AA     I   ++        P R  L++++P   +   +G +L + G
Sbjct:    3 ILIANDDGALAPGIAALHDALADMAECVV--VAPIKDMSGVSGSLTLDRPLHPQLLSNGFI---ALDGTPTDCVHLGLNGLLDP-VPDMVVSGINLGANLGDDVLYSGTVAAAIEGRFCKRPAFAFSL-----LSREPDNLPAA---AHIARTLVEHHERLALPPRTVLSVNIPNLPLERIRGIRLCRLG 178          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE1_PYRAE (5'-nucleotidase surE1 OS=Pyrobaculum aerophilum GN=surE1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPAD---CASLGVSQALFPSVPDLVISGINMGSNCGYHVVY-SGTVAGAREAFFHGVPSVSIS 507
            I+VTNDDG+ +PGLR L +  +S     V V AP+S KSA    IT   P+     D  G  A A SGTP+D    A+ G+ +       D+V+SGIN+G N    V+  SGT+  A +A   G+P+++ S
Sbjct:    3 ILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLATFGLGRKY-----DIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYS 126          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_PSEMY8.607e-1631.055'-nucleotidase surE OS=Pseudomonas mendocina (str... [more]
SURE_METST8.607e-1630.985'-nucleotidase surE OS=Methanosphaera stadtmanae ... [more]
SURE_EHRCR1.124e-1530.535'-nucleotidase surE OS=Ehrlichia chaffeensis (str... [more]
SURE_POLSJ1.468e-1529.475'-nucleotidase surE OS=Polaromonas sp. (strain JS... [more]
SURE_RHOFD2.504e-1538.585'-nucleotidase surE OS=Rhodoferax ferrireducens (... [more]
SURE_POLNA2.504e-1530.415'-nucleotidase surE OS=Polaromonas naphthalenivor... [more]
SURE_NATPD3.271e-1532.985'-nucleotidase surE OS=Natronomonas pharaonis (st... [more]
SURE_METS35.579e-1527.725'-nucleotidase surE OS=Methanobrevibacter smithii... [more]
SURE_AZOVD5.579e-1533.685'-nucleotidase surE OS=Azotobacter vinelandii (st... [more]
SURE1_PYRAE5.579e-1539.695'-nucleotidase surE1 OS=Pyrobaculum aerophilum GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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