CK935259

Overview
NameCK935259
Unique NameCK935259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_AGRT5 (5'-nucleotidase surE OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=surE PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.951e-24
Identity = 74/211 (35.07%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKMGWRRVTSEMQGGKML 756
            I++TNDDG+ A GL  L R+   T    V + AP++++S ++HS+T   P+  R         +A+ GTP DC  +G+ + L P  PDLV+SG+N G+N    V YSGT+AGA E    GV S ++S  +  G+  V  + + AE   P    +L ++ N   P+  FLN++ P   P + +G  +T QG    K+ +     E Q G+ L
Sbjct:    3 ILLTNDDGVHAEGLAVLERI-ARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDKH---FALRGTPTDCVIMGIREVL-PEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRSFALSQAFSHGEGRVVPWEV-AETYAP---DLLRKLMNVDLPDGTFLNLNFPNCAPKDMQGVSVTGQG----KLDFGLTVEERQDGRGL 200          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_XYLFT (5'-nucleotidase surE OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGK-SNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQG 693
            ++V+NDDG+DAPG++ L   L +   + V V APD ++S  S+S+T   PI A+  D      Y+V+GTP DC  L ++  L    PD+V+SGIN   N G  V+YSGTV+ A E  F G+P+V++S   +  +      Y  AA A + I+    A+++    P    LN+++P       +G+K+T+ G
Sbjct:    3 VLVSNDDGVDAPGIKILADALRNAG-HEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH---TYSVAGTPTDCVHLALT-GLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIV----AQLKTDPLPADTILNVNVPDVTWQQMRGFKVTRLG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_XYLFM (5'-nucleotidase surE OS=Xylella fastidiosa (strain M12) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGK-SNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQG 693
            ++V+NDDG+DAPG++ L   L +   + V V APD ++S  S+S+T   PI A+  D      Y+V+GTP DC  L ++  L    PD+V+SGIN   N G  V+YSGTV+ A E  F G+P+V++S   +  +      Y  AA A + I+    A+++    P    LN+++P       +G+K+T+ G
Sbjct:    3 VLVSNDDGVDAPGIKILADALRNAG-HEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH---TYSVAGTPTDCVHLALT-GLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIV----AQLKTDPLPADTILNVNVPDVTWQQMRGFKVTRLG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_XYLFA (5'-nucleotidase surE OS=Xylella fastidiosa GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGK-SNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQG 693
            ++V+NDDG+DAPG++ L   L +   + V V APD ++S  S+S+T   PI A+  D      Y+V+GTP DC  L ++  L    PD+V+SGIN   N G  V+YSGTV+ A E  F G+P+V++S   +  +      Y  AA A + I+    A+++    P    LN+++P       +G+K+T+ G
Sbjct:    3 VLVSNDDGVDAPGIKILADALRNAG-HEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH---TYSVAGTPTDCVHLALT-GLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLYREGQQAPQYETAAHAAINIV----AQLKTDPLPADTILNVNVPDVTWQQMRGFKVTRLG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_XYLF2 (5'-nucleotidase surE OS=Xylella fastidiosa (strain M23) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGK-SNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQG 693
            ++V+NDDG+DAPG++ L   L +   + V V APD ++S  S+S+T   PI A+  D      Y+V+GTP DC  L ++  L    PD+V+SGIN   N G  V+YSGTV+ A E  F G+P+V++S   +  +      Y  AA A + I+    A+++    P    LN+++P       +G+K+T+ G
Sbjct:    3 VLVSNDDGVDAPGIKILADALRNAG-HEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH---TYSVAGTPTDCVHLALT-GLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIV----AQLKTDPLPADTILNVNVPDVTWQQMRGFKVTRLG 184          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_STRM5 (5'-nucleotidase surE OS=Stenotrophomonas maltophilia (strain R551-3) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 73/191 (38.22%), Postives = 110/191 (57.59%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 693
            I+V+NDDG+DA G+R L  VL     + V V APD ++S  S+S+T   PI  +  D   V+   V+GTP DC  L ++  L    PD+V+SGIN  +N G  V+YSGTV+ A E  F G+P+V++S   V    +   +  AA A + I+    A ++    P    LN+++P D+P N  KG+++T+ G
Sbjct:    3 ILVSNDDGVDAAGIRMLASVLREAG-HEVTVVAPDRDRSGASNSLTLDLPIRLKRIDHYTVS---VAGTPTDCVHLALT-GLLEFEPDIVVSGINNAANLGDDVIYSGTVSAAMEGRFLGLPAVAVSL--VSRNHDPKHFETAARAAVEIV----ARLKADPLPADTILNVNVP-DLPWNEVKGFEVTRLG 181          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_ROSDO (5'-nucleotidase surE OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 67/195 (34.36%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSL--VRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNV--NDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 693
            I++TNDDGI+APGL  L  +   ++     V   AP  E+S V H I++  P+        G   +A  G+PADC   G+   +  S PDLV+SG+N G+N   + +YSGT+ GA EA   G+P++++S  + G ++N   N +  +A+  + ++  ILA    +T   R F N++ P  +P ++  G +L  QG
Sbjct:    3 ILITNDDGINAPGLMVLHEIATRLAGQDGEVWTVAPAFEQSGVGHCISYTRPMMVAQM---GPRRFAAEGSPADCVLAGLHDVMKDSPPDLVLSGVNRGNNSAENTLYSGTIGGAMEAALQGLPAIALS-QYYGPRNNAIENPFEASAQHGVDVVQRILAHTPQETGGYRLFYNVNFP-PVPGDEVLGIRLATQG 192          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PROMH (Multifunctional protein surE OS=Proteus mirabilis (strain HI4320) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 74/192 (38.54%), Postives = 113/192 (58.85%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIP--NNKGYKLTKQGT 696
            I+V+NDDG+ A G+++L + L    RY VQ+ APD  +SA S+S+T   P+  +  +   +    V GTP DC  LGV+  + P  PD+V+SGIN G N G  V+YSGTVA A E  F G+P++++S D   G+++ +  T A   C      +LA ++         LNI++P DIP    KG+++T+ G+
Sbjct:    4 ILVSNDDGVMAKGIQTLAKAL--RQRYDVQIVAPDRNRSAASNSLTIDRPLRKQRHENGDIAI--VEGTPTDCVYLGVNHLVRPR-PDIVVSGINHGPNLGDDVLYSGTVAAATEGRFLGLPAIAVSLD---GETHFD--TAAQVTC-----DVLAMLQRVPLRAGNILNINVP-DIPLAEIKGFRITRCGS 179          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_PETMO (5'-nucleotidase surE OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 78/193 (40.41%), Postives = 115/193 (59.59%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF-DGVTAYAVSGTPADCASLGVSQALFPSVP-DLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS-YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQ 690
            I+++NDDGI +PG+ +L   L    ++ V V APD E+SA  H IT R+P+ A+   F D    +AV+GTPADC  +G+  A++  +  D+VISGIN G+N G  V+YSGTV+ A E    G PS+++S  D+    SN N      E    ++  IL ++    +PE   LN+++P  IP +  KG K+TKQ
Sbjct:    3 ILLSNDDGIMSPGIITLKTYL--QQKHDVYVVAPDIERSATGHGITVRNPLWAKKVKFGDTFFGHAVNGTPADCVKIGLD-AIYKDIHFDVVISGINRGANLGTDVLYSGTVSAALEGAVGGYPSIAVSCVDF----SNPN-----FEDGAKVVLNILEKLDLNNWPEFTTLNVNIP-KIPYDEMKGIKITKQ 182          
BLAST of CK935259 vs. ExPASy Swiss-Prot
Match: SURE_METSB (5'-nucleotidase surE OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=surE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 69/190 (36.32%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  127 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 693
            I+VTNDDG+ APGLR L  +  + +   V V AP+S++S V+HS++   P+  R         YAV GTP DC  +GV + L    PD+V+SG+N G N    V+YSGTVAGA E    G+P++++S  + G       +   A+A  P    ++ +I     P    +N++ P   P+  +G  +T QG
Sbjct:    3 ILVTNDDGVHAPGLRVLEEIAAALSD-DVYVVAPESDQSGVAHSLSLNDPLRLRRIS---ERRYAVKGTPTDCVIMGVRRILDGREPDVVLSGVNSGQNVAEDVIYSGTVAGAMEGAILGIPAIALSQAY-GRAGREKAFWSCAQAHAP---GLIEKILATGVPANTVVNVNFPDCPPDAVEGVAVTAQG 184          
The following BLAST results are available for this feature:
BLAST of CK935259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_AGRT52.951e-2435.075'-nucleotidase surE OS=Agrobacterium tumefaciens ... [more]
SURE_XYLFT3.855e-2436.135'-nucleotidase surE OS=Xylella fastidiosa (strain... [more]
SURE_XYLFM3.855e-2436.135'-nucleotidase surE OS=Xylella fastidiosa (strain... [more]
SURE_XYLFA3.855e-2436.135'-nucleotidase surE OS=Xylella fastidiosa GN=surE... [more]
SURE_XYLF23.855e-2436.135'-nucleotidase surE OS=Xylella fastidiosa (strain... [more]
SURE_STRM53.855e-2438.225'-nucleotidase surE OS=Stenotrophomonas maltophil... [more]
SURE_ROSDO3.855e-2434.365'-nucleotidase surE OS=Roseobacter denitrificans ... [more]
SURE_PROMH3.855e-2438.54Multifunctional protein surE OS=Proteus mirabilis ... [more]
SURE_PETMO3.855e-2440.415'-nucleotidase surE OS=Petrotoga mobilis (strain ... [more]
SURE_METSB3.855e-2436.325'-nucleotidase surE OS=Methylocella silvestris (s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935259 ID=CK935259; Name=CK935259; organism=Citrus sinensis; type=EST; length=815bp
GGGAAACGCACGACTAAGGACTAACAATTCTTCTTCTTCTTCTTCTTGGA
CCGAACAATCCTGTAGCCGGAGGAAGAAATGGAGCGTCGTGGAATCGCTA
TTGTTAACTCCGATCACAAGCCAACGATTATGGTCACCAACGACGACGGG
ATCGACGCGCCTGGTTTGCGTTCCCTCGTCCGCGTTCTCGTCTCCACCAA
TCGCTACACCGTCCAAGTCTGCGCCCCCGATTCAGAAAAATCGGCTGTTA
GTCATAGTATTACTTGGCGTCACCCAATTTCGGCCAGACCAGCAGATTTT
GATGGAGTTACAGCCTATGCCGTGTCTGGAACTCCAGCAGATTGTGCATC
GTTGGGTGTCTCGCAAGCACTCTTTCCTTCGGTCCCTGACCTGGTAATCA
GTGGCATAAACATGGGTAGCAACTGTGGTTATCATGTTGTTTACTCTGGG
ACAGTTGCAGGTGCTCGAGAGGCTTTCTTTCATGGTGTACCGTCTGTCTC
TATATCATACGACTGGGTTGGAGGTAAGAGCAATGTTAATGATTACACAC
TCGCTGCTGAGGCTTGTTTACCTATTATAAATGCAATACTGGCCGAGATC
AGGAATCAAACTTATCCTGAAAGATGCTTTCTAAACATAGATCTACCTAC
AGATATTCCTAATAATAAGGGGTATAAACTTACTAAGCAGGGTACGAGCA
TATTCAAAATGGGGTGGAGACGAGTCACTTCTGAGATGCAAGGAGGGAAG
ATGTTATCAACAATGACAATGGACACAGATTCAGCAGTTACAATTGAAAC
AGATACATCTACCCC
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