CK935265

Overview
NameCK935265
Unique NameCK935265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_CAPAA (Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.866e-22
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EEAG DLPYSCRAG+CS+CAGK+  G+VDQ+DG+FLDD+Q+E G++LTC++ P SD  I++HKE EL
Sbjct:   26 DQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.866e-22
Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G+DLPYSCRAG+CS+CAGK+VSG +DQSD SFLDD+Q+ AG++LTC + P SD VI++HKE++L
Sbjct:   69 DQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.866e-22
Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G+DLPYSCRAG+CS+CAGK+VSG +DQSD SFLDD+Q+ AG++LTC + P SD VI++HKE++L
Sbjct:   69 DQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.437e-22
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++ P SD  I++HKEEEL
Sbjct:   26 DRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_DATIN (Ferredoxin OS=Datura inoxia PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.437e-22
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++ P SD  I++HKEEEL
Sbjct:   26 DRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 45/70 (64.29%), Postives = 60/70 (85.71%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++ P SD +I++HKEEEL
Sbjct:   26 DQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++ P SD  I++HKEEEL
Sbjct:   26 DQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++ P SD  I++HKEEEL
Sbjct:   26 DQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            D  EE G+DLPYSCRAG+CS+CAGK+  G VDQSDGSFLDD Q+  G++LTC++ P SD  I++HKEEEL
Sbjct:   26 DQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95
[Close]
BLAST of CK935265 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22
Identity = 44/70 (62.86%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    4 DAXEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISCPTSDCVIQSHKEEEL 213
            DA E AG+DLPYSCRAGACS+CAG + +G VDQSD SFLDD+Q++ G++LTC++ P SDC+I +H+EE +
Sbjct:   76 DAAERAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145
The following BLAST results are available for this feature:
BLAST of CK935265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_CAPAA1.866e-2264.29Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=... [more]
FER1_ORYSJ1.866e-2265.71Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER1_ORYSI1.866e-2265.71Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER_DATME2.437e-2264.29Ferredoxin OS=Datura metel PE=1 SV=1[more]
FER_DATIN2.437e-2264.29Ferredoxin OS=Datura inoxia PE=1 SV=1[more]
FER_SCOJA3.183e-2264.29Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FER_DATST3.183e-2264.29Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU3.183e-2264.29Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_COLES3.183e-2265.71Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FER_PHYPA4.157e-2262.86Ferredoxin, chloroplastic OS=Physcomitrella patens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935265 ID=CK935265; Name=CK935265; organism=Citrus sinensis; type=EST; length=506bp
GGGGATGCANNNGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGCCGCGC
TGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACC
AGTCAGATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTG
CTGACTTGCATTTCATGCCCGACTTCAGATTGCGTGATTCAGTCTCACAA
GGAAGAAGAGCTTTGCTGAGTACTGTCGGTTGATTTAGGGTTTTTCAAGT
ATGAACTGTGATCAAGTGCCTGAGTATGCCGATAAGGTTTCTCATGGACC
TACAATATTTTTTAGATTTCAGTGTGTTGTCTTGTGCAATGGAATCTTTA
AATTTTCATTTGGTTATACTATTACTGGCATTTTGGGATTTCATTTCATG
TGAAAGGGTGTATAATTTCTCAAAATAAGATAATTACCCCCGAAAAAAAA
AAAAACCAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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