CK935270

Overview
NameCK935270
Unique NameCK935270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 517
            YRGVR+RPWGK+AAEIRD +K+G R+WLGT+DT E AA AYD+AA+ MRG  A LNFP
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFP 72          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 2
Query:  341 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 514
            +YRGVR+RPWGKFAAEIRD  +NG R+WLGT+++ E AALAYD+AAF MRGS A LNF
Sbjct:   81 SYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNF 138          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  305 AATMTREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEPQP 550
            + T  RE+H    YRGVRKRPWG++AAEIRD  K  +R+WLGT+DTPE AALAYD AA  +RG KAK NFPS ++ ++   P
Sbjct:    3 STTCAREVH----YRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLDLNHLP 79          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 2
Query:  335 RVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLI 526
            R +YRGVR+RPWGK+AAEIRD KK  +R+WLGT++T E AALAYD AA K +GSKAKLNFP  +
Sbjct:   87 RRHYRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERV 149          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 2
Query:  341 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 517
            +YRGVR+RPWGK+AAEIRD  K G R+WLGT+DT   AA  YD+AAFK+RGSKA LNFP
Sbjct:   71 HYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 2
Query:  308 ATMTREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 517
            +T T +     +YRGVR+RPWGK+AAEIRD  K G R+WLGTYDT   A  AYD+AAF++RG KA LNFP
Sbjct:   76 STKTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEPQPHGITKK 568
            YRGVR+R WGK+ AEIR   KN +RLWLGT++T E AALAYD+AAF++RG  AKLNFP+LI  ++ P P  +  K
Sbjct:   71 YRGVRQRHWGKWVAEIR-LPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHEDMNPLPSSVDTK 144          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  200 HDTVKEGWISFDQLDGKSTPHAPPQAQASGFRLQKAATMTREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP--SLIASN 535
            HD  +   + ++Q D    P APP             T  + +  + +YRGVR+RPWGK+AAEIRD +K  +R+WLGT++T E AALAYD AA K +GSKAKLNFP  + +ASN
Sbjct:   59 HDNNQHQPVVYNQQD--PNPPAPP-------------TQDQGLLRKRHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASN 156          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 2
Query:  317 TREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 517
            T+      +YRGVR+RPWGKFAAEIRD  K GSR+WLGT+++   AA AYD AAFK+RG KA LNFP
Sbjct:   98 TKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEPQP 550
            YRGVR+R WGK+ AEIR + +N +RLWLGT+DT E AA+AYDR AFK+RG  A+LNFP L  +  EP P
Sbjct:  187 YRGVRQRHWGKWVAEIR-KPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPELFLNKQEPTP 254          
The following BLAST results are available for this feature:
BLAST of CK935270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
ERF96_ARATH2.719e-1870.69Ethylene-responsive transcription factor ERF096 OS... [more]
ERF92_ARATH2.719e-1872.41Ethylene-responsive transcription factor 1B OS=Ara... [more]
ERF81_ARATH2.719e-1858.54Ethylene-responsive transcription factor 12 OS=Ara... [more]
EF114_ARATH2.719e-1868.75Ethylene-responsive transcription factor ERF114 OS... [more]
EF105_ARATH2.719e-1871.19Ethylene-responsive transcription factor ERF105 OS... [more]
EF104_ARATH3.551e-1861.43Ethylene-responsive transcription factor ERF104 OS... [more]
ERF56_ARATH4.638e-1860.00Ethylene-responsive transcription factor ERF056 OS... [more]
EF115_ARATH4.638e-1847.37Ethylene-responsive transcription factor ERF115 OS... [more]
EF107_ARATH4.638e-1864.18Ethylene-responsive transcription factor ERF107 OS... [more]
ERF53_ARATH6.057e-1862.32Ethylene-responsive transcription factor ERF053 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_G08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935270 ID=CK935270; Name=CK935270; organism=Citrus sinensis; type=EST; length=878bp
GGGGAAACACAGTACAGATCACTCTCAAATCCAAGAANNNACAGCAAAAT
CATAACATCATATTCCCCGGCAAATTAAATTCAAGCTTAACTTTTCGTTT
ACAGATTAAAGTTTCAGCTTCAGTGATACACATAAACTCTTGAACTCAAG
CCCTAACTCTGATTCAATCCATTGAAATATGGAGGATTGCGAAGCTTTAC
ACGACACTGTTAAGGAGGGGTGGATTTCGTTTGATCAGCTTGATGGAAAG
TCGACGCCTCATGCTCCGCCTCAGGCTCAGGCTAGTGGATTTCGTTTACA
GAAGGCAGCCACGATGACACGTGAGATTCACGTGCGTGTAAATTATCGAG
GTGTGAGGAAGAGGCCGTGGGGAAAGTTTGCTGCGGAGATAAGGGATCGT
AAAAAGAATGGCTCACGACTTTGGCTGGGGACCTATGATACGCCTGAGGG
TGCTGCGTTGGCTTATGATAGAGCCGCTTTCAAGATGCGCGGCTCAAAAG
CCAAGCTTAATTTTCCAAGCCTCATTGCCTCAAACGTTGAGCCTCAGCCT
CACGGAATTACGAAAAAGAATATGGCTTCTTCTTCGTCATCCTCATCCAT
CGCTGCAGATTAAATCTCCGAATTTGGGTTTAATTAGCTGAGAAATAATA
TTTCTACTTATTTTTGAAGTAATTGACATTAATTCGCCTTTTATTAATAT
TAATGTTGTGTGTATATATATGTATGTATGTATGATGTATCTGCCCTGCT
TCATGTATCGTTTGGGTGATTTGATGATCCGTAATTGTAACAACTGGTGC
AATTCATAACTTGACCCCAGTCCATCGATCAATGTACGTAACGATTTTCT
TAAAAAAAAAAAAAAAAAAAAAAAAAAA
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