CK935270

Overview
NameCK935270
Unique NameCK935270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  335 RVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNV 538
            R ++RGVR+R WGK+ AEIR+  + GSRLWLGT+ T + AA AYD AA  M G  A+LNFP   AS V
Sbjct:   76 RCSFRGVRQRIWGKWVAEIREPNR-GSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSDASEV 142          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 514
            + GVR+RPWG++AAEIRD      R WLGT+DT   AALAYDRAA  MRG++A+ NF
Sbjct:   36 FLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMRGTQARTNF 91          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  341 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL 523
            N+RGVR R WGK+ +EIR+ +K  SR+WLGT+ TPE AA A+D AA  ++G  A LNFP L
Sbjct:   39 NFRGVRMRQWGKWVSEIREPRKK-SRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPEL 98          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL 523
            YRGVR R WGK+ +EIR+ +K  SR+WLGT+ TPE AA A+D AA  ++G+ A LNFP L
Sbjct:   43 YRGVRMRTWGKWVSEIREPRKK-SRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPEL 101          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIAS 532
            Y+GVR+R WGK+ AEIR+  + G+RLWLGT+DT   AALAYD AA K+ G +A LN P  + S
Sbjct:   42 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRS 103          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF---PSLIASNVEPQP 550
            +RGVR+RPWGK+AAEIRD ++   R+WLGT++T E AA+ YD AA ++RG  A  NF   P       EP+P
Sbjct:  125 FRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEP 195          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 514
            + GVRKRPWG+++AEIRDR     R WLGT+DT E AA AYD AA ++RG+KAK NF
Sbjct:  116 FMGVRKRPWGRWSAEIRDRIGR-CRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNF 171          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEP 544
            YRGVR R WGK+ +EIR+ +K  SR+WLGT+ TPE AA A+D AA  ++G+ A LNFP L  S   P
Sbjct:   51 YRGVRMRNWGKWVSEIREPRKK-SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRP 116          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:  344 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL 523
            YRGVR+R WGK+ AEIR+ KK  +RLWLG++ T E AA+AYD AA K+ G  A LN P L
Sbjct:   28 YRGVRQRTWGKWVAEIREPKKR-ARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHL 86          
BLAST of CK935270 vs. ExPASy Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 2
Query:  338 VNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 514
            + Y GVR+RPWG++AAEIR+      R WLGT+DT E AALAYDRAA  +RG  A+ NF
Sbjct:   37 IKYVGVRRRPWGRYAAEIRNPTTK-ERYWLGTFDTAEEAALAYDRAARSIRGLTARTNF 94          
The following BLAST results are available for this feature:
BLAST of CK935270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
DRE2A_ARATH1.001e-1257.35Dehydration-responsive element-binding protein 2A ... [more]
ERF86_ARATH1.307e-1261.40Ethylene-responsive transcription factor ERF086 OS... [more]
ERF39_ARATH1.307e-1257.38Ethylene-responsive transcription factor ERF039 OS... [more]
ERF37_ARATH1.307e-1258.33Ethylene-responsive transcription factor ERF037 OS... [more]
DRE2D_ARATH1.307e-1257.14Dehydration-responsive element-binding protein 2D ... [more]
CRF3_ARATH1.307e-1251.39Ethylene-responsive transcription factor CRF3 OS=A... [more]
ERF84_ARATH2.229e-1263.16Ethylene-responsive transcription factor ERF084 OS... [more]
DREB3_ARATH2.229e-1255.22Dehydration-responsive element-binding protein 3 O... [more]
DRE2F_ARATH2.912e-1260.00Dehydration-responsive element-binding protein 2F ... [more]
ERF87_ARATH3.803e-1259.32Ethylene-responsive transcription factor ERF087 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_G08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935270 ID=CK935270; Name=CK935270; organism=Citrus sinensis; type=EST; length=878bp
GGGGAAACACAGTACAGATCACTCTCAAATCCAAGAANNNACAGCAAAAT
CATAACATCATATTCCCCGGCAAATTAAATTCAAGCTTAACTTTTCGTTT
ACAGATTAAAGTTTCAGCTTCAGTGATACACATAAACTCTTGAACTCAAG
CCCTAACTCTGATTCAATCCATTGAAATATGGAGGATTGCGAAGCTTTAC
ACGACACTGTTAAGGAGGGGTGGATTTCGTTTGATCAGCTTGATGGAAAG
TCGACGCCTCATGCTCCGCCTCAGGCTCAGGCTAGTGGATTTCGTTTACA
GAAGGCAGCCACGATGACACGTGAGATTCACGTGCGTGTAAATTATCGAG
GTGTGAGGAAGAGGCCGTGGGGAAAGTTTGCTGCGGAGATAAGGGATCGT
AAAAAGAATGGCTCACGACTTTGGCTGGGGACCTATGATACGCCTGAGGG
TGCTGCGTTGGCTTATGATAGAGCCGCTTTCAAGATGCGCGGCTCAAAAG
CCAAGCTTAATTTTCCAAGCCTCATTGCCTCAAACGTTGAGCCTCAGCCT
CACGGAATTACGAAAAAGAATATGGCTTCTTCTTCGTCATCCTCATCCAT
CGCTGCAGATTAAATCTCCGAATTTGGGTTTAATTAGCTGAGAAATAATA
TTTCTACTTATTTTTGAAGTAATTGACATTAATTCGCCTTTTATTAATAT
TAATGTTGTGTGTATATATATGTATGTATGTATGATGTATCTGCCCTGCT
TCATGTATCGTTTGGGTGATTTGATGATCCGTAATTGTAACAACTGGTGC
AATTCATAACTTGACCCCAGTCCATCGATCAATGTACGTAACGATTTTCT
TAAAAAAAAAAAAAAAAAAAAAAAAAAA
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