CK935276

Overview
NameCK935276
Unique NameCK935276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEB8 (Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS185) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/180 (32.22%), Postives = 82/180 (45.56%), Query Frame = 1
Query:  238 LFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 768
            ++Q+S V +PE +W    K I  +    P   + +T    H  +  W     LN +  CL    H  +  + VAI+W  D   E     +TY EL   V   ANAL +    +GD + I MPM   A +  LA    G V   +   F+   IA+R+   K+K I T D  +RGGR  PL
Sbjct:   27 MYQESIV-NPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAIPL 198          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEB5 (Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/180 (32.22%), Postives = 82/180 (45.56%), Query Frame = 1
Query:  238 LFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 768
            ++Q+S V +PE +W    K I  +    P   + +T    H  +  W     LN +  CL    H  +  + VAI+W  D   E     +TY EL   V   ANAL +    +GD + I MPM   A +  LA    G V   +   F+   IA+R+   K+K I T D  +RGGR  PL
Sbjct:   27 MYQESIV-NPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAIPL 198          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_MARAV (Acetyl-coenzyme A synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 61/203 (30.05%), Postives = 86/203 (42.36%), Query Frame = 1
Query:  247 KSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAXXL-------KAIVLPAIGND 831
            + +VE P  +W    K I  + +   K      D +     W    VLN +  CL    H  +  +  AI++  D  D S    +TY+EL E+    AN L D    KGD + I MPM V   +  LA    G +   +   F+   +A R+   K++ + T D  LRGGR  PL   V  A          K IV+   GND
Sbjct:   29 RQSVEDPNTFWGEHGKRIDWI-KPFTKVKNSTYDYNNLSIKWFEDGVLNASANCL--DRHLEQRGDQTAIIFEGD--DPSVSRNVTYRELYEETCKFANVLKDQGVKKGDVVTIYMPMIVETAVAMLACARIGAIHSVVFGGFSPEALAARIVNGKSRFVITADEGLRGGRAIPLKKNVDSALKHEDDAKVDKVIVVSRTGND 226          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHESW (Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain W3-18-1) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12
Identity = 57/180 (31.67%), Postives = 82/180 (45.56%), Query Frame = 1
Query:  238 LFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 768
            ++Q+S V +PE +W    K I  +    P   + +T    H  +  W     LN +  CL    H  +  + VAI+W  D   E     +TY EL   V   ANAL +    +GD + I MPM   A +  LA    G V   +   F+   IA+R+   K+K + T D  +RGGR  PL
Sbjct:   27 MYQESIV-NPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVVITSDEGMRGGRAIPL 198          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEPC (Acetyl-coenzyme A synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12
Identity = 57/180 (31.67%), Postives = 82/180 (45.56%), Query Frame = 1
Query:  238 LFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 768
            ++Q+S V +PE +W    K I  +    P   + +T    H  +  W     LN +  CL    H  +  + VAI+W  D   E     +TY EL   V   ANAL +    +GD + I MPM   A +  LA    G V   +   F+   IA+R+   K+K + T D  +RGGR  PL
Sbjct:   27 MYQESIV-NPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLSEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVVITSDEGMRGGRAIPL 198          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SERP5 (Acetyl-coenzyme A synthetase OS=Serratia proteamaculans (strain 568) GN=acs PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12
Identity = 57/188 (30.32%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  226 TSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRT--DKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            T ++ + + +V+ PE +W    K +  +    P   +  T  D       W     LN+A  CL    H  +  +  AI+W  D  D +    +TYK+L   V   AN L  +   KGD +AI MPM   A +  LA    G V   I   F+   +A R+  S +K + T D  LR GR  PL   V
Sbjct:   22 TQYQQYYQQSVQDPETFWGEQGKILDWI---KPYSRVKNTSFDPGHISIRWFEDGTLNLAANCL--DRHLAERGDQTAIIWEGD--DPTQSKQVTYKQLHHDVCQFANVLKKLGVKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNSKLVITADEGLRAGRAVPLKKNV 202          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEDO (Acetyl-coenzyme A synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12
Identity = 58/198 (29.29%), Postives = 88/198 (44.44%), Query Frame = 1
Query:  193 KLLGRAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRT-DKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            ++   A+ D  T  R++Q S +++PE +W    K I  +   +   +   + D +     W     LN +  CL    H  +  + +AI+W  D   E     ++Y+EL  QV   AN L      KGD + + MPM   A +  LA    G V   I   F+   IA+R+   K+K I T D  +R GR  PL   V
Sbjct:   12 QISAHAHIDEQTYQRMYQAS-IDNPERFWGEQGKRIDWITPYSQTQVKKTSFDANNLSIQWFADGTLNASSNCL--DRHLERNGDKIAILWEGDDAKEQ--RQLSYRELHTQVCQFANVLKAQGVVKGDIVTLYMPMVPEAAVAMLACARIGAVHSVIFGGFSPDSIASRVIDGKSKVIITADEGIRAGRTIPLKHNV 204          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_RHOP5 (Acetyl-coenzyme A synthetase OS=Rhodopseudomonas palustris (strain BisA53) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12
Identity = 54/195 (27.69%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  205 RAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            RA+ D      ++ +S V  P  +W+   + +  +    P  +++ T  +    +  W    VLN+A  C+    H +   + VAI+W  D  D S    +TY++L ++V  +AN L +    KGD + I +PM   A    LA    G +   +   F+   +A R+    +K + T D  LRGGR  PL + V
Sbjct:   15 RAFVDDAKYQEMYARS-VNDPNGFWKDEAQRVDWI---KPFSVVENTSFAPGNVSIKWFEDGVLNVAANCI--DRHLKDRADQVAIIWEGD--DPSESRKITYRQLHDEVCKMANVLRNRNVQKGDRVTIYLPMIPEAAFAMLACARIGAIHSVVFGGFSPDSLAQRITDCASKVVITADEGLRGGRTVPLKANV 201          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHELP (Acetyl-coenzyme A synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=acsA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 62/210 (29.52%), Postives = 96/210 (45.71%), Query Frame = 1
Query:  235 RLFQKSTVEHPEAYWEIALKEISVV--FREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------XXLKAIVLPAIGNDV 834
            +++Q+S V +PE +W    + I  +  F +  K   D  + S +   W     LN +  CL    H     + +AI+W  D  D +    +TY EL  +V   ANAL +    +GD + + MPM   A ++ LA    G +   +   F+   IA+R+   K+K + T D  +RGGR  PL + +  A          K IVL   GN V
Sbjct:   26 KMYQESVV-NPEGFWREHGQRIDWMKPFTKVKKTSFDDHNLSIN---WFYDGTLNASVNCL--DRHLADNADKLAIIWEGD--DAADQRTLTYGELHTEVCKFANALRSQGVRRGDVVTVYMPMVPEAAVVMLACARIGAIHSVVFGGFSPDSIASRVIDGKSKVVITADEGVRGGRTIPLKANIDEALSHPDVTCVEKVIVLERTGNPV 227          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEPK (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas putida (strain KT2440) GN=acsA2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 48/184 (26.09%), Postives = 81/184 (44.02%), Query Frame = 1
Query:  232 FRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            +R   + +VE P+ +W    K +  +    P   + + D       W  G+ LN++  C+    H  +     A++W  D  D      +TY+EL  QV  +ANA+      KGD ++I MPM   A    LA    G +   +   F+   +  R+  +  + + T D  +RGG++ PL   V
Sbjct:   24 YRRLYRQSVEDPDTFWAEQAKRLDWI---KPWSSVQQCDLHTGKARWFDGAQLNVSYNCI--DRHLAQRGEQTALLWEGD--DPKDSKAITYRELHRQVCRLANAMKARGVKKGDRVSIYMPMIPEAAFAMLACTRIGAIHSVVFGGFSPDALRDRILDADCRTVITADEGVRGGKRIPLKQNV 200          
The following BLAST results are available for this feature:
BLAST of CK935276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ACSA_SHEB81.225e-1232.22Acetyl-coenzyme A synthetase OS=Shewanella baltica... [more]
ACSA_SHEB51.225e-1232.22Acetyl-coenzyme A synthetase OS=Shewanella baltica... [more]
ACSA_MARAV1.225e-1230.05Acetyl-coenzyme A synthetase OS=Marinobacter aquae... [more]
ACSA_SHESW1.600e-1231.67Acetyl-coenzyme A synthetase OS=Shewanella sp. (st... [more]
ACSA_SHEPC1.600e-1231.67Acetyl-coenzyme A synthetase OS=Shewanella putrefa... [more]
ACSA_SERP51.600e-1230.32Acetyl-coenzyme A synthetase OS=Serratia proteamac... [more]
ACSA_SHEDO2.090e-1229.29Acetyl-coenzyme A synthetase OS=Shewanella denitri... [more]
ACSA_RHOP52.090e-1227.69Acetyl-coenzyme A synthetase OS=Rhodopseudomonas p... [more]
ACSA_SHELP2.730e-1229.52Acetyl-coenzyme A synthetase OS=Shewanella loihica... [more]
ACSA2_PSEPK2.730e-1226.09Acetyl-coenzyme A synthetase 2 OS=Pseudomonas puti... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935276 ID=CK935276; Name=CK935276; organism=Citrus sinensis; type=EST; length=845bp
GGGGATATTAAATGGGCTAGATTAGTACCACAAGAATGGCGAAATAGAGC
CAAACACTGTATGACTCAAAATAAAGATTAATCTTGGCATCAAAGTTTGA
ATCTTTCTCCTAACGGATACCTATGCTTTTCAAACATCAGAGATCAATCG
AAGCTTACTAACTTAGGAAATGCATTGGAAATTCATGGACCAAAGCTCCT
AGGGCGTGCGTACAAAGACCCCATAACAAGTTTTAGGCTCTTTCAGAAAT
CCACAGTTGAACATCCTGAGGCTTATTGGGAAATTGCTCTTAAAGAGATT
TCAGTTGTATTCCGCGAGGCCCCGAAATGTATTTTAGACAGAACTGACAA
ATCAAAGCATGGTGGAACATGGCTTCCAGGTTCAGTTTTAAATATTGCTG
AATGTTGTTTGCTACCCTCAAATCATCGGAGAAAAGAGGACAATACTGTG
GCTATTGTGTGGAGAGAGGATAGATGTGATGAATCTGCTGTTAACCTTAT
GACATACAAGGAACTCCGCGAACAAGTAATGTTGGTGGCTAATGCATTGG
ATACAATGTTCTCAAAGGGTGATGCAATTGCAATTGACATGCCTATGACA
GTCCGTGCAGTTATTATATATTTGGCTATTATACTAGCAGGATATGTTGT
AGTATCAATAGCTGACAGCTTTGCAGCTAGGGAGATTGCAACTCGTTTGC
GAGTGTCTAAAGCCAAGGGTATCTTTACTCAGGATTTTATTCTCAGAGGA
GGAAGAAAATTTCCTTTATACAGTAAAGTTCTAGGCGCNNNNNNTCTTAA
AGCTATTGTGCTCCCTGCGATCGGAAATGATGTAGGTATTCCATT
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