CK935329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935329 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.622e-18 Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 28 ENFSNELYEMRFNLKTGLASQKRLSASAVDFP----RVNECYTGRKQRYVYGTILDSIVKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPQRVPYGFHAFFVSEEQLEEQA 534 E ++ L E+R NLKTG ++++ + +V VN GRK RY Y I + KV+G K DL G V+ F G ++G E F+PR + E+D GY++ F HDE++ +S +++++A T+ + A V+LP RVPYGFH FV+ + QA Sbjct: 433 EQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLST------------GEVKNHF-YGGKKYGGEPFFLPRGLESDGEDD-GYIMSFVHDEESWESELHIVNAVTLELE--ATVKLPSRVPYGFHGTFVNSADMLNQA 589
BLAST of CK935329 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17 Identity = 55/173 (31.79%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 28 ENFSNELYEMRFNLKTGLASQKRLSASA----VDFPRVNECYTGRKQRYVYGTILDSIVKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPQRVPYGFHAFFVSEEQLEEQA 534 E+ + L E+R NL+TG ++++ + + A ++ VN GRK ++ Y + + KV+G K DL + G V+ + G +FG E +F+P EE GY++ F HDEK KS + +++A+ + + A ++LP RVPYGFH F+ + L +QA Sbjct: 462 ESLKSVLSEIRLNLRTGKSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDLFS------------GEVQK-YMYGEEKFGGEPLFLPN----GEEEGDGYILAFVHDEKEWKSELQIVNAQNLKLE--ASIKLPSRVPYGFHGTFIHSKDLRKQA 615
BLAST of CK935329 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 19 EKLENFSNELYEMRFNLKTGLASQKRLSASA---VDFPRVNECYTGRKQRYVYGTILDSIVKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE-EDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPQRVPYGFHAFFVSEEQLEEQ 531 E+ E+ + L E+R NL+T +++ L + ++ VN GRK R+ + I KV+G K DL E K GG ++G E F+P G E ED GY+ HDE+T S + +I+A + + A ++LP RVPYGFH FV +L +Q Sbjct: 423 ERDESLRSVLSEIRINLRTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLCTG---EMKKYIYGGE----------KYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTSELQIINAVNLKLE--ATIKLPSRVPYGFHGTFVDSNELVDQ 582 The following BLAST results are available for this feature:
BLAST of CK935329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935329 ID=CK935329; Name=CK935329; organism=Citrus sinensis; type=EST; length=750bpback to top |