CK935334

Overview
NameCK935334
Unique NameCK935334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.023e-25
Identity = 69/179 (38.55%), Postives = 98/179 (54.75%), Query Frame = 1
Query:  226 AKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEK-IEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQV 756
            +  V LL F  S F  R+++AL  KG+  YE  EE++ +KSP LLE+NPV+KK+P+ IH  K + ESL ILEYIDE W E+ PLLP DPYQR+ ARFWA Y +  +      +                 + K +EGE   K+      G  N+G++++A      W   +E   +F +
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGI-KYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYF----GGDNLGFVDVALVPFTSWFYSYETCANFSI 176          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQN--PLLPRDPYQRAMARFWAKYSEE 534
            +EV LL FW S F  R+++AL +K +  YEY +ED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDK 106          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21
Identity = 67/200 (33.50%), Postives = 100/200 (50.00%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNP-LLP-------RDPYQRAMARFWAKYSEELMAKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTK 801
            KE+ LL FW SPF  R ++A+ +KG+ ++EY EED+ NKS  LL  NPV++K+PV +H  + V+ESL+IL+Y+D+ +   P LLP          Y RA ARFWA Y +  +      L  L               L  +E E  G        G   +G++++A      W   +E  G F V   +  P +  W+ +
Sbjct:    5 KELVLLDFWVSPFGQRCRIAMAEKGL-EFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARR 200          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20
Identity = 66/200 (33.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNP--LLPRD------PYQRAMARFWAKYSEELMAKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTK 801
            KE+ LL FW SPF  R ++A+ +KG+ ++EY EED+ NKS  LL  NPV++K+PV +H  + V+ESL+IL+Y+D+ +   P  L P +       Y RA ARFWA Y +  +      L  L               L  +E E  G        G   +G++++A      W   +E  G F V   +  P +  W+ +
Sbjct:    5 KELVLLDFWVSPFGQRCRIAMAEKGL-EFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARR 200          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 1
Query:  241 LLGFWASPFVFRVKVALQQKGVVDYEYIEEDIF-NKSPRLLELNPVYKKVPVFIHGE-KVVNESLIILEYIDETWEQNP-------LLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXX--GLEKIEGEFKGKSG--LLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHP 816
            +LG   SPF  R ++AL  +GV  YE ++E +   KS RLL  NPVY K+PV +  + + + ES +I++YI++   ++        LLP DPY+RAM RFW  + ++    A  A+ L                 L  +E  FK +S     F+ G++  G L+LA G  L  L   E      ++D    P++  WS +F  HP
Sbjct:    3 VLGGEVSPFTARARLALDLRGVA-YELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHP 206          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.428e-12
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  241 LLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPR--LLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMAR 510
            L  +W S   +RV++AL  K V DYEY   D+ ++  +  L E+NP   KVP F+   +V+ ESL I+EY++ET    PLLP+DP +RA AR
Sbjct:    8 LYSYWRSSCSWRVRIALALKNV-DYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHAR 97          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.790e-11
Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIF---NKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAM 504
            +++ L  F  S   +RV++AL  KG+ D+EY   D+F   + +P  L+LNP+   VPV +HG+ V+ +SL I+ Y++E + +NPLLP+D  +RA+
Sbjct:    7 QKMQLYSFSLSSCAWRVRIALHLKGL-DFEYKAVDLFKGEHLTPEFLKLNPL-GYVPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRAL 99          
The following BLAST results are available for this feature:
BLAST of CK935334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTX1_NICPL6.023e-2538.55Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTXC_TOBAC2.289e-2451.92Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTU1_ORYSJ6.891e-2133.50Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.176e-2033.00Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE2.895e-1932.68Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
MAAI_CAEEL3.428e-1244.57Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
GSTZ1_DIACA3.790e-1140.00Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_H03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935334 ID=CK935334; Name=CK935334; organism=Citrus sinensis; type=EST; length=820bp
GCGGGGAAATTAAGGTCAAACTTGGCGTCTCNNNGTTACCTTGTAATTAA
GTTGAAGGCTCGAAGCTTTTAAAGTCAACCAGTCAACCTGTGCTTAACCA
ATTTATAAAAAAGGGGGTTTAATTATTACACACAGAATATCATCTCATCA
TCACCACCACAAGAAATAAATCATCTCATCACAAAGCATTACAGAGATCA
ATTAACTATCAGCGAAAATAATATGGCCAAAGAAGTGACGCTTTTGGGGT
TTTGGGCAAGTCCATTTGTGTTCAGGGTAAAAGTCGCTCTGCAGCAGAAG
GGTGTTGTTGATTATGAATACATTGAAGAAGACATCTTTAACAAGAGCCC
CAGGCTCTTGGAACTGAACCCAGTTTATAAGAAGGTTCCTGTGTTCATCC
ATGGCGAGAAAGTGGTCAATGAATCGTTGATTATTCTTGAGTACATCGAT
GAGACATGGGAGCAAAATCCTTTGTTGCCTCGAGACCCTTACCAAAGAGC
CATGGCTCGTTTCTGGGCTAAGTATTCAGAAGAACTGATGGCGAAAGCAT
TTATGGCTCTGGTTTTGAAAGGAGAGGCAAAGGAGAAAAATGCGAAAGAA
TTTGCAGAAGGATTGGAGAAGATAGAAGGGGAATTCAAGGGAAAGAGCGG
CTTATTGTTTGCTGAAGGAGAGAGCAATATTGGGTATTTGGAACTTGCAT
TTGGTTGGATTCTTTACTGGCTGCCTGTTTGGGAAGAAGCTGGATCCTTT
CAAGTTCTTGACCCTCAGAAATTTCCAGTCATCACTGAATGGAGCACCAA
GTTTGTGAATCACCCTCTCA
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