CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB3_BOVIN (Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 9.689e-111 Identity = 188/245 (76.73%), Postives = 210/245 (85.71%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID +G Y GD+DLQLER++VYYNEAS ++VPRA+L+DLEPGTMDSVRSG +G +FRPDNF+FGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 399.438 bits (1025), Expect = 1.265e-110 Identity = 188/245 (76.73%), Postives = 208/245 (84.90%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQIGAKFWEVV EHGI+ G Y G+NDLQLER++VYYNE ++VPRAVL+DLEPGTMDSVRSGP G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDRMM T+SV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTLKL+TP++GDLNHL+S MSG+T CLRFPGQ Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIERDGLYKGNNDLQLERISVYYNEIGASKYVPRAVLVDLEPGTMDSVRSGPLGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSIVMSGITTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 2.158e-110 Identity = 189/245 (77.14%), Postives = 209/245 (85.31%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIG KFWEV+ EHGID G Y GD+ LQLER+NVYYNE+S ++VPRA L+DLEPGTMDSVRSGP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT LRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 4.809e-110 Identity = 185/245 (75.51%), Postives = 210/245 (85.71%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQIG+KFWEV+ EHGI G + G+ DLQLER++VYYNEA+ G++VPRAVL+DLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKEAE CDCLQGFQ+ H ISKIREEYPDR+M +FSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC+RTLKLT P++GDLNHL+S TMSGVT CLRFPGQ Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 6.280e-110 Identity = 187/245 (76.33%), Postives = 209/245 (85.31%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQIGAKFWEVV EHGI + G+Y G +DLQLER++VYYNE + ++VPRAVL+DLEPGTMDSVRSGP+G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTLKL TP++GDLNHL+S MSG+T CLRFPGQ Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIATDGQYKGTSDLQLERISVYYNEVAGNKYVPRAVLIDLEPGTMDSVRSGPFGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLQTPTYGDLNHLVSIVMSGITTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB6_MOUSE (Tubulin beta-6 chain OS=Mus musculus GN=Tubb6 PE=1 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 6.280e-110 Identity = 188/245 (76.73%), Postives = 209/245 (85.31%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIG KFWEV+ EHGID G Y GD+ LQLER++VYYNE+S ++VPRA L+DLEPGTMDSVRSGP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT LRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB3_DROME (Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=1 SV=2) HSP 1 Score: 397.127 bits (1019), Expect = 6.280e-110 Identity = 188/251 (74.90%), Postives = 213/251 (84.86%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASC------GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+++Q GQCGNQIGAKFWE++ EHGIDS G Y GD+DLQLERV+VYYNEAS G++VPRA+L+DLEPGTM+SVRSGPYGQ+FRPDNFV+GQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE ENCDCLQGFQ+ H ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLK++ PS+GDLNHL+S TMSGVT CLRFPGQ Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQ 251
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 1.071e-109 Identity = 184/245 (75.10%), Postives = 209/245 (85.31%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQIGA FW+ + EHG+D +G YNG +DLQLER+NVY+NEAS ++VPRAVL+DLEPGTMD+VR+GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D VLDVVR+EAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLS+HQLVEN+DE +DNEALYDIC RTLKLT PS+GDLNHL+SA MSGVT CLRFPGQ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQLERLNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLTNPSYGDLNHLVSAVMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 1.071e-109 Identity = 183/245 (74.69%), Postives = 206/245 (84.08%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQ+GAKFWEVV EHGIDS G Y GD DLQLER+NVYYNE + ++VPRAVL+DLEPG +DS+R+ G +FRPDNF QSGAGNNWAKGHYTEGAEL++SV+DVVRKEAENCDCLQGFQ+CH ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLS+HQLVENADE M +DNEALYDICFRTLKLTTP++GDLNHL+S MSG+T CLRFPGQ Sbjct: 1 MREIVHVQVGQCGNQVGAKFWEVVSEEHGIDSAGTYKGDTDLQLERINVYYNEVAGSKYVPRAVLVDLEPGVLDSIRASSIGSMFRPDNFTHAQSGAGNNWAKGHYTEGAELVESVVDVVRKEAENCDCLQGFQICHSLGGGTGSGLGTLLISKIREEFPDRMMCTFSVMPSPKVSDTVVEPYNATLSIHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSGVMSGITACLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB_VENIN (Tubulin beta chain OS=Venturia inaequalis PE=3 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 1.399e-109 Identity = 185/245 (75.51%), Postives = 208/245 (84.90%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+H+Q GQCGNQIGA FW+ + EHG+D +G YNG +DLQLER+NVY+NEAS +FVPRAVL+DLEPGTMD+VR+GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D VLDVVR+EAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDIC RTLKL PS+GDLNHL+SA MSGVT CLRFPGQ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQLERMNVYFNEASGNKFVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQ 245 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |