CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 1.217e-129 Identity = 221/245 (90.20%), Postives = 228/245 (93.06%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIG+KFWEVVC EHGID TGRY G++DLQLERVNVYYNEASCGR+VPRA+LMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB8_MAIZE (Tubulin beta-8 chain OS=Zea mays GN=TUBB8 PE=2 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 2.076e-129 Identity = 223/245 (91.02%), Postives = 226/245 (92.24%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIG+KFWEVVC EHGID TGRY G +DLQLERVNVYYNEASCGRFVP AVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPGAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 2.076e-129 Identity = 221/245 (90.20%), Postives = 227/245 (92.65%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIG+KFWEVVC EHGID TGRY G +D+QLERVNVYYNEASCGRFVPRAVLMDLEPGTMD+VR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYMGTSDVQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB2_SOYBN (Tubulin beta-2 chain OS=Glycine max GN=TUBB2 PE=3 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 2.712e-129 Identity = 223/245 (91.02%), Postives = 226/245 (92.24%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MRE LHIQGGQCGNQIGAKFWEVVCAEHGID TGRY GD++LQLER+NVYYNEASCGRFV RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MRESLHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQLERINVYYNEASCGRFVRRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADESMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_GOSHI (Tubulin beta-5 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 3.541e-129 Identity = 219/245 (89.39%), Postives = 228/245 (93.06%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIGAKFWEV+C EHG+D+TG+YNGD+DLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB3_ORYSJ (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica GN=TUBB3 PE=2 SV=2) HSP 1 Score: 460.299 bits (1183), Expect = 6.041e-129 Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GD+DLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica GN=TUBB5 PE=1 SV=1) HSP 1 Score: 459.914 bits (1182), Expect = 7.889e-129 Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GD+DLQLER+NVYYNEAS GRFVPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 459.914 bits (1182), Expect = 7.889e-129 Identity = 221/245 (90.20%), Postives = 226/245 (92.24%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIGAKFWEV+C EHGID TGRY GD+DLQLER+NVYYNEAS GRFVPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TPSFG+LNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGRYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPSFGELNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB7_ARATH (Tubulin beta-7 chain OS=Arabidopsis thaliana GN=TUBB7 PE=2 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 1.030e-128 Identity = 221/245 (90.20%), Postives = 227/245 (92.65%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIG+KFWEVV EHGID TGRY GD++LQLERVNVYYNEASCGR+VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 1.030e-128 Identity = 220/245 (89.80%), Postives = 226/245 (92.24%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GD+DLQLER+NVYYNEAS GRFVPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQ 245 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |