CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.404e-53 Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD VRK ++ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 102/246 (41.46%), Postives = 147/246 (59.76%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPR V +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF + + + ++ +Y + L F +PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R L + P++ +LN LI+ +S +T LRF G Sbjct: 1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_NEOCA (Tubulin alpha chain OS=Neospora caninum GN=TUBA PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 102/246 (41.46%), Postives = 147/246 (59.76%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPR V +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF + + + ++ +Y + L F +PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R L + P++ +LN LI+ +S +T LRF G Sbjct: 1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA3_BOVIN (Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA3C_HUMAN (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53 Identity = 102/246 (41.46%), Postives = 147/246 (59.76%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G Q G WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP D VR+G Y Q++ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+NC LQGF V H + ++ +Y + L+F++ P+P+V+ VVEPYN+ LS H L+E+ D LDNEALYD+C R L + P++ +LN L++ +S +T LRF G Sbjct: 1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA2_PATVU (Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.217e-53 Identity = 99/246 (40.24%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + + GQ G Q+G WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+ID VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P++S VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G Sbjct: 1 MRECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52 Identity = 104/249 (41.77%), Postives = 148/249 (59.44%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGD-----NDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G Q+G WE+ C EHGI G+ D ND + N +++E G+ VPR V +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+ID LD +RK A+NC LQGF + + ++ +Y + L F +PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC + L + P++ +LN LI+ +S +T LRF G Sbjct: 1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPPDQAGRAND---DAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICKKNLDIERPTYTNLNRLIAQVISSLTASLRFDG 246 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |