CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 101/250 (40.40%), Postives = 149/250 (59.60%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVN------VYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + + GQ G QIG WE+ C EHGI + G + Q ++N +++E G+ VPRAV++DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E ID VLD +RK + C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LIS +S +T LRF G Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFG----TQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.019e-51 Identity = 98/246 (39.84%), Postives = 147/246 (59.76%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + I GQ G Q+G WE+ C EHGI G+ D + + + N ++ E G+ VPRAV +DLEP +D VRSG Y Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+ C LQGF + + ++ EY + L +++P+P+ + +VVEPYN+ L+ H +E++D C ++DNEA++DIC R L ++ P++ +LN LI +S +T LRF G Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMVDNEAIFDICQRNLDVSRPTYTNLNRLIGQIVSSITASLRFEG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51 Identity = 100/247 (40.49%), Postives = 147/247 (59.51%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL---ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G QIG WE+ EHGI G D E + +++E G++VPRA+ +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D +LD VR+ ++ CD LQGF H + ++ +Y + L F+V+P+P+VS +VVEPYN L+ H +E+AD ++DNEA+YD+C R L + P+F LN+LI+ +S VT LRF G Sbjct: 1 MREVISINVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCRRNLDIARPNFSSLNNLIAQVVSSVTASLRFDG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51 Identity = 101/247 (40.89%), Postives = 146/247 (59.11%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL---ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G QIG WE+ EHGI G E + +++E G+FVPRA+ +DLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G E++D V + +RK A+ CD LQGF H + + EY + L F+V+P+P++S +VVEPYN L+ H +E+AD ++DNEA+YDIC R L ++ PSF +LN LI+ +S VT LRF G Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51 Identity = 103/249 (41.37%), Postives = 147/249 (59.04%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MREI+ + GQ G QI WE+ C EHGI G R D D + +++E G++VPR + DLEP +D VR+G Y +F P++ + G+ A NN+A+GHYT G ELID VLD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E+AD ++DNEA+YDIC R L L P++ +LN LI+ +S +T LRF G Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPD---HGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 105/253 (41.50%), Postives = 154/253 (60.87%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGD-------NDLQLERVNVYYNEASCGR-FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMM-LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 REI+ I GQ G Q+G WE+ C EHGI+ G D N+L + + +++E++ G+ VPRA+ +DLEP +D +R+G Y +F P+ + G+ A NN+A+GHYT G ELID +D +R+ A+ CD LQGF V H + K+ +Y + L F V+PSP+VS +VVEPYN+ LS H L+E+ D +LDNEA+Y+IC +L + P++ +LN LI+ +S +T LRFPGQ Sbjct: 3 REIISIHIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKD-LGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSFMLDNEAIYNICKNSLDIEKPTYTNLNRLIAQVISSLTSSLRFPGQ 254
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 99/246 (40.24%), Postives = 145/246 (58.94%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE + + GQ G Q+G WE+ C EHGI G+ D + + ++ E G+ VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ NN+A+GHYT G E+ID VLD +RK A+ C LQGF H + ++ +Y + L FS++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LIS +S +T LRF G Sbjct: 1 MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHSFGGGTGSGFTSLLMERLSGDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.270e-51 Identity = 100/246 (40.65%), Postives = 146/246 (59.35%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ I GQ G QI WE+ C EHGI G + Q + + +++E G+ VPRA+ DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G ELID VLD +R+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E++D ++DNEA+YDIC R L L P++ +LN LI+ +S +T LRF G Sbjct: 1 MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGHYTVGKELIDGVLDKIRRVADNCAGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.270e-51 Identity = 101/248 (40.73%), Postives = 149/248 (60.08%), Query Frame = 1 Query: 106 MREILHIQG-GQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQL---ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ + GQ G QIG WE+ EHGI G E + ++NE G+FVPRAV +DLEP +D VR+G Y ++F P+ + G+ A NN+A+GHYT G EL+D +LD +RK ++ CD LQGF H + ++ +Y + L F+V+P+P+VS +VVEPYN L+ H +E+AD ++DNEA+Y++C + L ++ PSF +LN+LI+ +S VT LRF G Sbjct: 1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYEMCKKNLDISRPSFANLNNLIAQVVSSVTASLRFDG 248
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51 Identity = 99/245 (40.41%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REIL + GQ GNQIG++FW +CAEHGI G +R +V++ +A ++PRAV++DLEP +DS++SGPY ++ P+NF + G AGNNWAKG Y G + + V++++ +EAE D L+GF + H + ++ + YP +++ T+SVFP D VV+PYN+ LS+ +L +AD +VLDN AL IC L + SF N L+S MS T LR+PG Sbjct: 3 REILTVSAGQAGNQIGSEFWSQLCAEHGISKEGVLEDWATDMTDRKDVFFYQADDEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKG-YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSIAGGTGSGLGSYLLERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPG 246 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |