CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 94/246 (38.21%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ +Q GQCGNQIG++FW+ +C EHGI G ++R +V++ ++ R++PRA+L+DLEP ++++ S YG ++ P+N + ++ GAGNNWA G Y+ + + ++D++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP S VSD VV+PYN+ L++ +L NAD +VLDN AL I L P+F N L+S MS T LR+PG Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.799e-48 Identity = 100/253 (39.53%), Postives = 145/253 (57.31%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNV----YYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE L I GQ G QIG WE+ C EHGI G +++ + ++E +N +++E G+ VPR + MDLEP +D +R G Y +F P+ V G+ A N +A+G Y+ G+E+I+ VL+ +RK AE C LQGF + + ++ EY ++ L FSV+PSP++S VVEPYNA L+ H +E +D ++DNEALYDIC L + PS+ +N LI+ S +T LRF G Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIGRPSYASINRLIAQVSSSITASLRFEG 253
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.349e-48 Identity = 95/245 (38.78%), Postives = 142/245 (57.96%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 825 MRE++ + GQ G QI WE+ C EHGI G R D D + N +++E G++VPR + DLEP +D VR+GPY +F P+ + G+ A NN+A+GHYT G E+ID LD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PS+ + N L++ S +T + Sbjct: 1 MREVVSLNVGQAGGQIANSCWELYCLEHGIQPDGYLTEERKAADPD---QGFNTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGPYRALFHPEQMITGKEDASNNYARGHYTVGKEMIDQCLDKVRRVADNCSGLQGFLVFHSFGGGQGSGFGALLMERLSVDYGKKTKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDVQFMVDNEAIYDICRRNLGIERPSYENSNRLMAQGQSPITAIM 242
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 93/246 (37.80%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ +Q GQCGNQ+G++FW+ +C EHGI G L+R +V++ ++ R++PRA+L+DLEP ++++ S YG ++ P+N GAGNNWA G Y ++ + ++D++ +EAE D L+GF + H + ++ + +P +++ T+SVFP+ + VSD VV+PYN+ L++ +L NAD +VLDN AL I L + P+F N L+S MS T LR+PG Sbjct: 3 REIITLQAGQCGNQVGSQFWQQLCLEHGICPDGTLEDFATEGLDRKDVFFYQSDDTRYIPRAILLDLEPRVVNNILSDTYGSLYNPENIFVATDGGGAGNNWAHG-YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 92/245 (37.55%), Postives = 151/245 (61.63%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ +Q GQCGNQ+GA +W+ +CAEHGI S G +R +V++ +A ++PRA+L+DLEP ++++ + PY ++ P+N + G AGNNWA+G Y+ G + + +++++ +EAE D L+GF V H + ++ +++P +++ T+SVFP+ + D VV+PYN+ L++ +LV +AD +VLDN AL I L + TPSF N L+S ++ T LR+PG Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGGDRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPG 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 1.166e-47 Identity = 95/244 (38.93%), Postives = 150/244 (61.48%), Query Frame = 1 Query: 112 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 EI+ +Q GQCGNQIG +FW+ +C EHGI +G + L+R +V++ +A ++PRAVL+DLEP ++++ Y +++ P+N + GAGNNWA G Y++G +L + V D++ +EA+ D L+GF +CH + ++ + YP +++ TFSVFP+ ++SD VV+PYN+ L++ +L AD +VLDN AL I L + PSF +N+L+S MS T LR+P Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYP 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.523e-47 Identity = 99/253 (39.13%), Postives = 139/253 (54.94%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEAS---------CGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE L I GQ G QIG WE+ C EHGI G QLE + + AS G+ VPRA+ +DLEP +D +R+G + +F P+ + G+ A NN+A+G Y+ G+E+ID VL+ RK AE C LQGF + + ++ EY + L FSV+P+P++S VVEPYN+ L+ H E+ D ++DNEA+YDIC R L + PS +N L+ +S +T LRF G Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLRFEG 253
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 95/246 (38.62%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+++Q GQCGNQ+G++FW +C EHGI GR L +R +V++ +A +++PRA+L+DLEP ++ +++ +F P+N + GAGNNWA G YT+G + +++LD++ +EAE CD L+GF +CH + I + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I L L P +N LI+ M+ T LR+PG Sbjct: 3 REIINLQVGQCGNQVGSEFWRKLCQEHGIAKDGRLEDFATLGGDRKDVFFYQADDEQYIPRAILLDLEPRVINGIQTSDLRNLFNPENIFISKEGGGAGNNWASG-YTQGEAVQETLLDMIDREAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 96/257 (37.35%), Postives = 144/257 (56.03%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDL-------------QLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 MRE++ IQ GQCG QIG WE+ EHGI+ G +L ++ E G+ VPR++ +DLEP +D VR+G +++ P+ + G+ A NN+A+G Y+ G E+ID V ++K AE CD LQGF + H + ++ +Y + L F+V+PSPKVS VVEPYNA L+ H ++++D ++DNEA+YDIC +L + P++ +LN LI+ +S T LRF G Sbjct: 1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSG 257
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.684e-46 Identity = 94/246 (38.21%), Postives = 146/246 (59.35%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ IQ GQCGNQIG +FW+ +C EHGI G +R +V++ +A F+PR++L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G +++D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPG 247 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |