CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.199e-46 Identity = 94/246 (38.21%), Postives = 145/246 (58.94%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ IQ GQCGNQIG +FW+ +C EHGI G +R +V++ +A F+PR++L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G + +D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.872e-46 Identity = 93/246 (37.80%), Postives = 145/246 (58.94%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ IQ GQCGNQIG +FW+ +C EHGI G +R +V++ +A ++PRA+L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G +++D ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T LR+PG Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.899e-46 Identity = 89/245 (36.33%), Postives = 147/245 (60.00%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ +Q GQCGNQIG++FW+ +C EHGI++ G ++R +V++ ++ +VPRA+L+DLEP +DS+++ Y ++ +N + +GAGNNWA G Y +G D + D++ +EA+ + L+GF + H + ++ + +P +++ T+SVFP S VV+ YN+ L++ +L+ENAD +VLDN AL+ I L++ P+ N L+S MS T LR+PG Sbjct: 3 REIITLQVGQCGNQIGSEFWKQLCKEHGINAAGYLEEFAKPGIDRKDVFFYQSDDDHYVPRALLLDLEPRVIDSIKTSEYSGLYNQENIFVAEKGTGAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPG 244
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.398e-46 Identity = 95/250 (38.00%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ Q GQCGNQIG +FW+ +C EHGI+ G NG+ +R +V++ +A +VPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + +I + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGE-----DRKDVFFYQADDEHYVPRAVLIDLEPRVINCIQKSTYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPG 244
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.356e-46 Identity = 94/250 (37.60%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ Q GQCGNQIG +FW+ +C EHGI+ G NG+ +R +V++ +A +VPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGE-----DRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPG 244
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 8.356e-46 Identity = 94/250 (37.60%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG-----RYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ Q GQCGNQIG +FW+ +C EHGI+ G NG+ +R +V++ +A +VPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGE-----DRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPG 244
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.356e-46 Identity = 91/245 (37.14%), Postives = 146/245 (59.59%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ Q GQCGNQIG +FW+ +C EHGI+ G +R +V++ +A +VPRAVL+DLEP ++ ++ PY ++ P+N + GAGNNW +G Y + ++ + +++++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP+ +D VV+PYN LS+ +L+ NAD +VLDN AL I LKL P+F +N ++S M+ T LR+PG Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEEYAQNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSPYASLYNPENIFISKHGGGAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPG 244
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45 Identity = 91/244 (37.30%), Postives = 150/244 (61.48%), Query Frame = 1 Query: 112 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 EI+ +Q GQCGNQIG +FW+ +C EHGI G +R +V++ +A ++PRAVL+DLEP ++++ + PY +++ +N + GAGNNWA G +++G ++ + V D++ +EA+ D L+GF +CH + ++ E +P +++ T+SVFP+ ++SD VV+PYN+ L++ +L + AD +VLDN AL I L + TP+F +N+L+S MS T LR+P Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYP 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.425e-45 Identity = 93/246 (37.80%), Postives = 144/246 (58.54%), Query Frame = 1 Query: 109 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 REI+ +Q GQCGNQIG +FW+ +C EHGI G +R +V++ +A ++PRA+L+DLEP ++ +++G Y ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LT P+F N L+S MS T LR+PG Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPG 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.425e-45 Identity = 83/220 (37.73%), Postives = 138/220 (62.73%), Query Frame = 1 Query: 178 CAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 C EHGI GR + N + E ++++ S G +VPR +++DLEPG ++S+++G Y +++ P + G+ A NN+A+GHYT G E+I+ V++ +R+ A+NCD LQGF + H + ++ E+ + L FSV+P+PK++ VVEPYN+ L+ H ++ +D ++DNEA+YD+C R L + P + D+N +I+ +S +T LRFPG Sbjct: 3 CKEHGILPDGRLD-QNRMDDESAESFFSQTSVGTYVPRTLMVDLEPGVLESIKTGKYRELYHPGQLISGKEDAANNYARGHYTVGKEIIEPVMEQIRRMADNCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVYPAPKIATAVVEPYNSILTTHTTLDYSDCSFLVDNEAIYDMC-RNLGIQRPYYTDINRIIAQVVSSITASLRFPG 220 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |