CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.993e-39 Identity = 88/246 (35.77%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 112 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG--RYNGD-NDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 EI+ IQ GQCGN +G FW + EHGID G +YN D ++ + N ++ + + R+VPRA+++DLEP + V+S + +F P N G AGN+W+ G Y G + D ++D++ +E ++ D +GFQ+ H + + + Y + T+SVFPS K S+ VV PYN L++ +L E+AD ++ DN AL ++ RT + S+ N LIS+ +S +T LRFP Sbjct: 4 EIITIQVGQCGNHVGKYFWNQLLKEHGIDKDGYSKYNDDLTHIREDDTNPFFKQITNNRYVPRAIMIDLEPAAVTDVQSS-FNDLFNPRNTWVSSEGLGAGNSWSTG-YDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSVAGGTGSGLGSSLLEALTDRYSKSFITTYSVFPS-KQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDPNTSYEHTNQLISSALSSITNSLRFP 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.893e-39 Identity = 86/243 (35.39%), Postives = 137/243 (56.38%), Query Frame = 1 Query: 115 ILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGP-YGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS-DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 831 ++ + GQCGNQ+ FW+ + EHGI+ G+ ++D+ ++ ++Y +A +VPRAVL+DLEP ++ + P + +F DN GAGNNWA G Y +G E+ + ++D++ +EAEN + L G H + ++RE +P +++ T+SVF + S D VV PYN LS+ +L+EN D +VLDN AL+ + K TP+F +N L++ MS T RF Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRF 247
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.746e-35 Identity = 87/246 (35.37%), Postives = 135/246 (54.88%), Query Frame = 1 Query: 112 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLER---VNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 EI+ IQ GQCGNQ+G +FW + EHGI G+ D + R NV++ + RF PRA+L DLEP + V++ G F N + GAGN W+ G Y G E D ++++ KE + +GFQ+ H + + + Y +++ T+SVFPS + S+ VV+PYN L++ +L++N+D ++ DN+AL ++ R L+ + S+ N LI++ MS VT LRFP Sbjct: 4 EIISIQVGQCGNQVGKQFWGQLAREHGIGVDGQSLHPEDANVVREDDTNVFFRQNDHNRFTPRALLYDLEPSAIGDVQNCFPG-FFNERNVWISKEELGAGNTWSIG-YDYGLEKQDEFMNMIDKEIDATGNFEGFQLIHSVAGGTGSGLGSNLLEALSDRYHKKIVSTYSVFPS-RESEVVVQPYNTILTLRRLIDNSDASVLFDNDALLNLTARVLRDSNTSYQQTNQLIASVMSSVTNSLRFP 246
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.301e-34 Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 247 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 +V++ +A F+PR++L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G + +D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG Sbjct: 1 DVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPG 199
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.807e-32 Identity = 68/162 (41.98%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 355 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT-LKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 +F P+ + G+ A NN+A+GHYT G E++D LD VRK ++NC LQGF V + + ++ +Y + L F+++PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+ L + P++ +LN L+S +S +T LRF G Sbjct: 1 LFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLLDIERPTYTNLNRLVSQIISSLTTSLRFDG 162
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA4B_HUMAN (Putative tubulin-like protein alpha-4B OS=Homo sapiens GN=TUBA4B PE=5 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 6.867e-32 Identity = 69/176 (39.20%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 310 EPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 +P S + G Y QIF P+ + G+ A NN+A GHYT G E ID +LD +RK A+ C LQGF V H + + Y + L FS++P+P+VS +V+PYN+ L+ H +E++D ++DN+A+YDIC L + P++ +LN LIS +S +T LRF G Sbjct: 10 DPSQPLSRQHGTYRQIFHPEQLITGKEDAANNYAWGHYTIGKEFIDLLLDRIRKLADQCTGLQGFLVFHSLGRGTGSDVTSFLMEWLSVNYGKKSKLGFSIYPAPQVSTAMVQPYNSILTTHTTLEHSDCAFMVDNKAIYDICHCNLDIERPTYTNLNRLISQIVSSITASLRFDG 185
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_COCHE (Tubulin gamma chain (Fragment) OS=Cochliobolus heterostrophus GN=TUB4 PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32 Identity = 68/181 (37.57%), Postives = 107/181 (59.12%), Query Frame = 1 Query: 298 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 L DLEP + S+++ PY I+ P+NF + +GAGNNW G Y+ G ++ + + D++ +EA+ D L+GF + H + ++ + +P +++ T+SVFP+ + D VV+PYN+ LS+ +L +NAD +VLDN AL I L + TPSF N L+S MS T LR+P Sbjct: 1 LADLEPRVLHSIQASPYKNIYNPENFYIHKDGTGAGNNWGMG-YSMGEQVHEDIWDMIDREADGSDSLEGFMMLHSIAGGTGSGLGSYMLERLNDRFPKKLIQTYSVFPNTQDGDIVVQPYNSLLSMRRLTQNADSVVVLDNGALTRIAADRLHVMTPSFEQTNQLVSTVMSASTTTLRYP 180
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.691e-30 Identity = 67/153 (43.79%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 382 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMM-LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 837 G+ A NN+A+GHYT G ELI+ D +RK A+ C+ LQGF V H + ++ EY + L F V+PSP+VS +VVEPYN+ LS H L+E+ D +LDNEA+Y+IC ++L + P++ +LN LI+ +S +T LRFPG Sbjct: 3 GKEDAANNYARGHYTVGKELIEVCADRIRKLADQCEGLQGFLVFHSVGGGTGSGFGSLLLQRLALEYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSFMLDNEAIYNICKKSLDIEKPTYTNLNRLIAQVISSLTSSLRFPG 155
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30 Identity = 80/246 (32.52%), Postives = 126/246 (51.22%), Query Frame = 1 Query: 112 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLER---VNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 834 EI+ +Q GQCGN +G W + EH I + G + D ER ++ E S +F PRA++MD EP + V + + F P N G AGN+WA G Y G D +L+ + KE ++ D +GFQ+ H + + + YP +++ T+SVFP+ + S+ VV+ YN L++ +L+E++D +V DN +L +I + + N LIS +S VT +RFP Sbjct: 4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDG-LSQLPDSSTERDDDTKPFFRENSRNKFTPRAIMMDSEPSVIADVEN-TFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFP 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28 Identity = 71/218 (32.57%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHG-IDSTGRYNGDNDLQLERVNVYY----NEASCGRFVP---RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI 735 M + + +Q GQCGNQIG FW++ EH ++ G Y+ V+ S G+ RAVL+D+E G ++ + GP +F + SG+GNNWA GH G+ D +L+ RK AE+CDCLQ F + H + + +E+P+ S++PS + D + PYN+ L++ +L E+AD + +DN++L+DI Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDI 217 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |