CK935337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_RAT (Tubulin beta-5 chain OS=Rattus norvegicus GN=Tubb5 PE=1 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_PONAB (Tubulin beta chain OS=Pongo abelii GN=TUBB PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_PIG (Tubulin beta chain OS=Sus scrofa GN=TUBB PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_PANTR (Tubulin beta chain OS=Pan troglodytes GN=TUBB PE=3 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_MOUSE (Tubulin beta-5 chain OS=Mus musculus GN=Tubb5 PE=1 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_MACMU (Tubulin beta chain OS=Macaca mulatta GN=TUBB PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_HUMAN (Tubulin beta chain OS=Homo sapiens GN=TUBB PE=1 SV=2) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_CRIGR (Tubulin beta-5 chain OS=Cricetulus griseus GN=TUBB5 PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB5_BOVIN (Tubulin beta-5 chain OS=Bos taurus GN=TUBB5 PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQL+R++VYYNEA+ G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245
BLAST of CK935337 vs. ExPASy Swiss-Prot
Match: TBB2_CHICK (Tubulin beta-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 2.911e-115 Identity = 196/245 (80.00%), Postives = 216/245 (88.16%), Query Frame = 1 Query: 106 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYNGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 840 MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GD+DLQLER+NVYYNEA+ ++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 245 The following BLAST results are available for this feature:
BLAST of CK935337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935337 ID=CK935337; Name=CK935337; organism=Citrus sinensis; type=EST; length=841bpback to top |