CK935338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935338 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.091e-26 Identity = 75/211 (35.55%), Postives = 102/211 (48.34%), Query Frame = 1 Query: 202 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEISPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRXXGYGLTTNIINGGIECGQGGNAAVRNR 816 E F + ++ + C + FYT +F+ AA ++ GF KREIAAFFA HET C+I+EI+ S DYCD N +PC+ KYYGRGP+Q+SWNYNY +PD +A DP +SFK+A+WFWM + H+V++ G+G T ING +EC AV R Sbjct: 93 EAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVMLQ---------------GFGATIRAINGALECNGKNPGAVNAR 267
BLAST of CK935338 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.174e-26 Identity = 82/214 (38.32%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 190 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEISPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRXXGYGLTTNIINGGIEC-GQGGNAA 804 I+S+ FD ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C I E YCD + YPC KYYGRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT + H V+ G+G TT ING +EC GQ + A Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT------NVHSVM---------------NQGFGATTKAINGALECNGQNQDQA 264
BLAST of CK935338 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.145e-26 Identity = 78/218 (35.78%), Postives = 106/218 (48.62%), Query Frame = 1 Query: 181 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEISPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRXXGYGLTTNIINGGIECGQGGNAAVRNR 816 +G I+++ F+ ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+I EI+ S DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM N V G+G T IN G+EC G + AV R Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWM---------------------NSVRPVLNQGFGATIRAIN-GMECNGGNSGAVNAR 247
BLAST of CK935338 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 73/211 (34.60%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 202 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEISPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRXXGYGLTTNIINGGIECGQGGNAAVRNR 816 E F + ++ + C + FYT +F+ AA+++ GF N KREIAAFFA HET C+I+EI+ + DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM N+V G+G T ING +EC AV R Sbjct: 90 EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNAR 264
BLAST of CK935338 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 72/216 (33.33%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 190 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEISPPS-DYCD----PNYPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRXXGYGLTTNIINGGIECGQGGNAAVRNR 816 I++ + + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+I EI S DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R Sbjct: 71 ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQAR 249 The following BLAST results are available for this feature:
BLAST of CK935338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935338 ID=CK935338; Name=CK935338; organism=Citrus sinensis; type=EST; length=816bpback to top |