CK935351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.159e-51 Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHAQ 659 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA+ Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAK 154
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS9 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9902) GN=petC PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.514e-51 Identity = 94/150 (62.67%), Postives = 112/150 (74.67%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T IP+ VP MG+RQ MNLL G+V+ L P A +F PP +GGGTTAKD +GN + A WL+TH GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ Sbjct: 2 TQIPSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVARYFIPPKAAGSGGGTTAKDELGNVVTATGWLSTHPEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9311) GN=petC PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.373e-51 Identity = 92/150 (61.33%), Postives = 112/150 (74.67%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN + A+ WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGNSVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.405e-51 Identity = 91/150 (60.67%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.405e-51 Identity = 91/150 (60.67%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.514e-51 Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN I A+ WL++H GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY++ G+VVRGPAPLSLALA+ Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGNPITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNR3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain RCC307) GN=petC PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.514e-51 Identity = 92/150 (61.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GND+ A+ WL H GDR+L +GLKGDPTYL+V+ ++ YGINA+CTHLGCVVPWN+ NKF+CPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGNDVTASGWLADHKEGDRSLVQGLKGDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGANKFMCPCHGSQYDATGKVVRGPAPLSLALAH 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.814e-51 Identity = 92/146 (63.01%), Postives = 109/146 (74.66%), Query Frame = 3 Query: 216 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAH 152
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.814e-51 Identity = 92/146 (63.01%), Postives = 109/146 (74.66%), Query Frame = 3 Query: 216 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAH 152
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.186e-50 Identity = 92/144 (63.89%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 656 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L GDR L +GLKGDPTY+VVE + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAHA Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHA 153 The following BLAST results are available for this feature:
BLAST of CK935351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935351 ID=CK935351; Name=CK935351; organism=Citrus sinensis; type=EST; length=666bpback to top |