CK935351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPX (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH8102) GN=petC PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.855e-50 Identity = 92/150 (61.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN I A WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALAN 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.855e-50 Identity = 90/150 (60.00%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAH 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.855e-50 Identity = 90/150 (60.00%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAH 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_THEEB (Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus elongatus (strain BP-1) GN=petC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 89/144 (61.81%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 656 VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL A Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKA 153
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_SYNEL (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus GN=petC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 89/144 (61.81%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 656 VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL A Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKA 153
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 90/144 (62.50%), Postives = 108/144 (75.00%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 656 VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +L +H GDR L +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+V+RGPAPLSLAL HA Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHA 153
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_NOSP7 (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.308e-50 Identity = 90/143 (62.94%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 225 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ +L GDR L +GLKGDPTY+VV+ + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKFLENRNAGDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAH 152
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROM4 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9211) GN=petC PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.123e-49 Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 3 Query: 213 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 P+D VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I A+ WL+ H GDR+L +GLKGDPTYL+VE + + ++GINA+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALAH 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROMA (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus GN=petC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.673e-48 Identity = 89/147 (60.54%), Postives = 106/147 (72.11%), Query Frame = 3 Query: 213 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 P+D VP MG+RQ MNLL G + L P A FF P G GGTTAKD +GN + A WL+ H GDR+L +GLKGDPTYL+V+ D + ++GINA+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLAL H Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVTATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALTH 151
BLAST of CK935351 vs. ExPASy Swiss-Prot
Match: UCRI_PROMS (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain AS9601) GN=petC PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.954e-48 Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 3 Query: 204 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 653 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAH 151 The following BLAST results are available for this feature:
BLAST of CK935351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935351 ID=CK935351; Name=CK935351; organism=Citrus sinensis; type=EST; length=666bpback to top |