CK935357

Overview
NameCK935357
Unique NameCK935357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG+  + K ++ +L+EA                      +  L  + HVAAQNC+    GAFTGE+S  M+ ++   WVILGHSERR++ NES++ V +KV +AL+ GL V+AC+GETL +RESG T  V   Q  AIA KI +   W  VV+AYEPVWAIGTGKVA+P QAQEVH  LRKW
Sbjct:    4 SRKFFVGGNWKMNGSRADNKVLIHSLSEAHFCGDTEILIAAPFVYLNEV--RQSLAKEIHVAAQNCYKVPKGAFTGEISPSMIKDVGCDWVILGHSERRSIFNESDELVAEKVQHALAEGLSVVACIGETLSERESGKTEEVCVRQLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVHNFLRKW 195
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 98/191 (51.31%), Postives = 124/191 (64.92%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + ++++TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+ALS GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    3 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 191
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 1.530e-48
Identity = 97/191 (50.79%), Postives = 125/191 (65.45%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + ++++TLN A+                     K  L +   VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDAKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 99/194 (51.03%), Postives = 125/194 (64.43%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG+ ++  K++  L+EA                      +  L+ + HVAAQNC+    GAFTGE+S  M+ ++   WVILGHSERR +  ES++ + +KV +AL+ GL VIAC+GETL +RES  T  V   Q KAIA KI +   W  VV+AYEPVWAIGTGKVATP QAQEVH  LRKW
Sbjct:    4 SRKFFVGGNWKMNGSRDDNDKLLKLLSEAHFDDNTEVLIAPPSVFLHEI--RKSLKKEIHVAAQNCYKVSKGAFTGEISPAMIRDIGCDWVILGHSERRNIFGESDELIAEKVQHALAEGLSVIACIGETLSERESNKTEEVCVRQLKAIANKIKSADEWKRVVVAYEPVWAIGTGKVATPQQAQEVHNFLRKW 195
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + +++ TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + +++ TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + +++ TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + +++ TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.609e-48
Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 3 
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVGGNWK NG  + + +++ TLN A+                     K  L     VAAQNC+    GAFTGE+S  M+ +    WV+LGHSERR +  ES++ +  KVA+AL+ GL VIAC+GE L++RE+G T  VV EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGW 192
[Close]
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_DROYA (Triosephosphate isomerase OS=Drosophila yakuba GN=Tpi PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.408e-48
Identity = 99/192 (51.56%), Postives = 125/192 (65.10%), Query Frame = 3 
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            M+RKF VGGNWK NG  + + +I  TL+ A                      ++LL  +  +A QN +    GAFTGE+S  ML ++   WVILGHSERRA+  ES+  + +K  +AL+ GLKVIAC+GETLE+RE+G T  VVA Q  A A+KI +W NVV+AYEPVWAIGTGK ATP QAQEVHA LR+W
Sbjct:    1 MSRKFCVGGNWKMNGDQKSIAEIAKTLSSAALDPNTEVVIGCPAIYLMYA--RNLLPCELGLAGQNAYKVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVHAFLRQW 190
The following BLAST results are available for this feature:
BLAST of CK935357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_SCHJA1.171e-4851.03Triosephosphate isomerase OS=Schistosoma japonicum... [more]
TPIS_RABIT1.171e-4851.31Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_CANFA1.530e-4850.79Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_SCHMA2.609e-4851.03Triosephosphate isomerase OS=Schistosoma mansoni G... [more]
TPIS_PONAB2.609e-4850.79Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR2.609e-4850.79Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_MACMU2.609e-4850.79Triosephosphate isomerase OS=Macaca mulatta GN=TPI... [more]
TPIS_MACFA2.609e-4850.79Triosephosphate isomerase OS=Macaca fascicularis G... [more]
TPIS_HUMAN2.609e-4850.79Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_DROYA3.408e-4851.56Triosephosphate isomerase OS=Drosophila yakuba GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_F10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935357 ID=CK935357; Name=CK935357; organism=Citrus sinensis; type=EST; length=653bp
GGGGACAAACAGGGCGCTTATTTCTCGNNNNNNCGTCTCGCTTTCATCGC
CAAACCAAACAAAATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGG
CGGCAACTGGAAATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTT
CTACATTGAATGAAGCTGAAGTCCCTTCTGAGGATGTTGTGGAGGTTGTT
GTAAGCCCTCCGTTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTC
TGATTTCCATGTTGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTT
TTACCGGGGAAGTTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGG
GTCATTCTTGGTCATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAACGA
TTTTGTTGAAGATAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCA
TTGCTTGTGTTGGAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTG
GCTGTTGTGGCTGAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTG
GGACAATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGA
AGGTTGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAA
TGG
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