CK935357

Overview
NameCK935357
Unique NameCK935357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.766e-42
Identity = 88/185 (47.57%), Postives = 115/185 (62.16%), Query Frame = 3
Query:  105 NWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            NWKCNG+ + + +++   N                        + L    F +AAQN  + K GAFTGEVS  +L +  + W++LGHSERRA   E+N+ V DKVA A++ G  VIAC+GETL++RESG T  VV  Q  AIA+K+  ++W  VV+AYEPVWAIGTGKVATP QAQE HA +R W
Sbjct:   11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKER-LSHPKFVIAAQNA-IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSW 193          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 3
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            M+R FFVGGN+K NG+ E +K IV  LN +E                     +SL +    VA QN + +  GAFTGEVS   L ++   WVILGHSERR +  ES++++ DK  YAL  GL VI C+GET++++++G T+ VV  Q   +  KI +W NVV+AYEPVWAIGTG  AT   AQ++H E+R +
Sbjct:    1 MSRTFFVGGNFKMNGSLESIKAIVERLNASELDPKTEVVISPPFPYLLLAK-ESLKKPTVSVAGQNSFDKGDGAFTGEVSVAQLKDVGAKWVILGHSERRTINKESSEWIADKTKYALDNGLDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAY 191          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.062e-41
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = 3
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFH-----VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            A KF VGGNWKCNGT   ++ +   +  + +                     + +L  + +     V+A+N W  K GA+TGEV   MLV+  +P+VILGHSERR + +ESN+ V +KV  A+  GLKVIAC+GET  QR +  T  VVA Q KAI   IS   W N++LAYEPVWAIGTGK ATP QAQEVH  +RKW
Sbjct:    3 AGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAWT-KSGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKW 200          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.270e-41
Identity = 82/192 (42.71%), Postives = 118/192 (61.46%), Query Frame = 3
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            MAR FF+GGN+K NG+   +K+IV  LN A                       +  R +  ++AQN + +  GA+TGE S E + ++   WVILGHSERR   NE+++ V +K  +AL  G+KVI C+GETLE+++   T+ VV  Q +A+ EK+ +W NVV+AYEPVWAIGTG  AT   AQ++H  +R++
Sbjct:    1 MARTFFIGGNFKMNGSKASIKEIVDRLNGASIPSNVEVVIAPPAIYLDHAVALNK-RKEVKISAQNAYSKASGAYTGENSVEQIKDVGAEWVILGHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREF 191          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 6.882e-41
Identity = 79/190 (41.58%), Postives = 119/190 (62.63%), Query Frame = 3
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 647
            MAR+FFVGGN+K NGT +++  I+  LN+A+                     ++  +    + AQN + +  GAFTGE  A  ++++   W + GHSERR ++ ES++F+ +K  +AL  G+KVI C+GETLE+R+ G T+ V A Q  A+++ +S+W N+V+AYEPVWAIGTG  ATP  A+E H  +R
Sbjct:    1 MARQFFVGGNFKANGTKQQITSIIDNLNKADLPKDVEVVICPPALYLGLAVEQNK-QPTVAIGAQNVFDKSCGAFTGETCASQILDVGASWTLTGHSERRTIIKESDEFIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIR 189          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.882e-41
Identity = 83/190 (43.68%), Postives = 116/190 (61.05%), Query Frame = 3
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 647
            MAR FFVGGN+K NG+ + +K+IV  LN A+                       +      V AQN + +  GA+TGE S + + ++   WVILGHSERR   NE ++ V +K A+AL RG+ VI C+GETL+++++G T+ VV  Q   + EK+ +W NVV+AYEPVWAIGTG  AT   AQ++HA +R
Sbjct:    1 MARTFFVGGNFKLNGSKQSIKEIVERLNTADLADNVEVVICPPATYLDHAV-SLVSHPQVTVGAQNAYTKASGAYTGENSVDQIKDVGAKWVILGHSERRTYFNEDDEQVAEKTAFALERGVSVILCIGETLDEKKAGVTLDVVKRQLTPVLEKVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHAAIR 189          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.938e-40
Identity = 84/191 (43.98%), Postives = 113/191 (59.16%), Query Frame = 3
Query:   84 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            R FFVGGN K NG+   ++ +   +NE+                        L    F V +QNC+    GAFTGE+SA MLV+L IP+VI+GHSERR + +ES++ +  K  YA+S GL VI C+GE L  R+S +T  +++EQ K  A      W  +V+AYEPVWAIGTG VATP +AQ+ H  +RKW
Sbjct:    5 RTFFVGGNHKMNGSKSMLESLSKGMNESVENKENVDIFIAPSYPYLEFLSNKLDNKKFKVCSQNCYSVAKGAFTGEISANMLVDLGIPYVIIGHSERRNVFSESSELITKKTKYAISLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKW 195          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.932e-39
Identity = 81/192 (42.19%), Postives = 113/192 (58.85%), Query Frame = 3
Query:   78 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            MAR FFVGGN+K NGT + +K+IV  LN A                        + +    V  QN + +  GA+TGE S + L ++   WVILGHSERR   +E +  V +K  +AL +GL VI C+GETLE++++G T+ VV  Q  A+  ++ +W NVV+AYEPVWAIGTG  AT   AQ++H  +R +
Sbjct:    1 MARTFFVGGNFKLNGTKKSIKEIVDRLNTASLPENVEVVICPPATYLDYTV-SLVSKKQVTVGGQNTYTKASGAYTGENSVDQLKDVGAKWVILGHSERRTYFHEDDKIVAEKTKFALDQGLGVILCIGETLEEKKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSY 191          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.754e-36
Identity = 79/195 (40.51%), Postives = 120/195 (61.54%), Query Frame = 3
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN----WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            AR+ F+GGN+KCNG+ + +K  V+++   +                      +  +    +AAQN ++   GA+TGE S EML+++ +  VI+GHSERR ++ E+N+    K   AL +G+ VI C GETL++R++ +T+ V   Q +A+ ++I      W+NVV+AYEPVW+IGTG VATP QA+EVH  LRKW
Sbjct:    3 ARRPFIGGNFKCNGSLDFIKSHVASIASYKIPESVDVVVAPSFVHLSTAIAANTSKC-LKIAAQNVYLEGNGAWTGETSVEMLLDMGLSHVIIGHSERRRIMGETNEQSAKKAKRALDKGMTVIFCTGETLDERKANNTMEVNIAQLEALKKEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKW 196          
BLAST of CK935357 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.308e-35
Identity = 82/191 (42.93%), Postives = 106/191 (55.50%), Query Frame = 3
Query:   81 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVEDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 653
            +RKFFVG NWK NG  + + +++ T N A                      K  L     VA QNC+    GAFTGE+S  M+ +L + WV+                   KVA+AL+  L VIAC+GE L++RE+G T  VV EQTK IA+ + +W  V+LAY+PVWA GTGK ATP QAQEVH +LR W
Sbjct:    4 SRKFFVGRNWKMNGRKKCLGELIGTQNAATVPADTKVICALATAYNELARQK--LAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVV-------------------KVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGW 173          
The following BLAST results are available for this feature:
BLAST of CK935357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_TRYBB4.766e-4247.57Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_YARLI8.130e-4245.31Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_ENTHI1.062e-4147.24Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPIS_KLULA5.270e-4142.71Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_CANAL6.882e-4141.58Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_ASHGO6.882e-4143.68Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]
TPIS_DICDI9.938e-4043.98Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_CANGA4.932e-3942.19Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPI2_GIALA1.754e-3640.51Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPISL_HUMAN3.308e-3542.93Putative triosephosphate isomerase-like protein LO... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_F10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935357 ID=CK935357; Name=CK935357; organism=Citrus sinensis; type=EST; length=653bp
GGGGACAAACAGGGCGCTTATTTCTCGNNNNNNCGTCTCGCTTTCATCGC
CAAACCAAACAAAATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGG
CGGCAACTGGAAATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTT
CTACATTGAATGAAGCTGAAGTCCCTTCTGAGGATGTTGTGGAGGTTGTT
GTAAGCCCTCCGTTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTC
TGATTTCCATGTTGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTT
TTACCGGGGAAGTTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGG
GTCATTCTTGGTCATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAACGA
TTTTGTTGAAGATAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCA
TTGCTTGTGTTGGAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTG
GCTGTTGTGGCTGAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTG
GGACAATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGA
AGGTTGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAA
TGG
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